RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 GPC4O75487 556 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 PGAM1P18669 254 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 FOXM1Q08050 763 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 TMED2Q15363 201 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 DNTTIP2Q5QJE6 756 aaKnown RBP24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 DCAF12Q5T6F0 453 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 HIBCHQ6NVY1 386 aaPredicted RBP24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 PRSS42Q7Z5A4 293 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 IGDCC3Q8IVU1 814 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 SLC22A15Q8IZD6 547 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 SNF8Q96H20 258 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 PANX3Q96QZ0 392 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 EBNA1BP2Q99848 306 aaKnown RBP24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 TRIT1Q9H3H1 467 aaKnown RBP24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 ZNF768Q9H5H4 540 aaKnown RBP24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 APMAPQ9HDC9 416 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 FBXO6Q9NRD1 293 aaPredicted RBP24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 CDYLQ9Y232 598 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 FAM169AQ9Y6X4 670 aa24.31■■□□□ 1.48
HTATSF1-203ENST00000448450 STMND1H3BQB6 276 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 TOX3O15405 576 aaPredicted RBP24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 NIPSNAP2O75323 286 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 S1PR4O95977 384 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 SH3BP2P78314 561 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 CYP4F2P78329 520 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 PRKAA1Q13131 559 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 FBXO38Q6PIJ6 1188 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 OTOAQ7RTW8 1153 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 PDIK1LQ8N165 341 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 RNF31Q96EP0 1072 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 TFB2MQ9H5Q4 396 aaKnown RBP24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 PLAGL1Q9UM63 463 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 PCDHGA3Q9Y5H0 932 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 SDK2Q58EX2 2172 aa24.3■■□□□ 1.48
HTATSF1-203ENST00000448450 GSAPA4D1B5 854 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 BTN3A3O00478 584 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 SEC31AO94979 1220 aaKnown RBP24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 WT1P19544 449 aaPredicted RBP24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 CHRM3P20309 590 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 RPL21P46778 160 aaKnown RBP24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 CRYMQ14894 314 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 HSP90AA5PQ58FG0 334 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 AMIGO1Q86WK6 493 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 TBC1D21Q8IYX1 336 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 GSDMBQ8TAX9 411 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 KLHL6Q8WZ60 621 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 CFAP36Q96G28 342 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 PPM1MQ96MI6 270 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 DDA1Q9BW61 102 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 ASPSCR1Q9BZE9 553 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 SLC25A18Q9H1K4 315 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 FBXO8Q9NRD0 319 aa24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 IARS2Q9NSE4 1012 aaKnown RBP24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 SIDT1Q9NXL6 827 aaKnown RBP24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 TSR3Q9UJK0 312 aaKnown RBP24.29■■□□□ 1.48
HTATSF1-203ENST00000448450 BTN3A1O00481 513 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 POLR1CO15160 346 aaPredicted RBP24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 SLCO2B1O94956 709 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 ESR1P03372 595 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 ERVK-10P10266 1014 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 PKMP14618 531 aaKnown RBP24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 ELK3P41970 407 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 ATP1A2P50993 1020 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 KPNA2P52292 529 aaKnown RBP24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 RAB15P59190 212 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 CEACAM20Q6UY09 585 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 KCNMB4Q86W47 210 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 OR5K2Q8NHB8 316 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 SKA2Q8WVK7 121 aaPredicted RBP24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 UBXN4Q92575 508 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 ELMO2Q96JJ3 720 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 OR6C1Q96RD1 312 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 DPH5Q9H2P9 285 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 INTS10Q9NVR2 710 aaKnown RBP24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 GEMIN8Q9NWZ8 242 aaKnown RBP24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 GALPQ9UBC7 116 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 CIDEBQ9UHD4 219 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 POLG2Q9UHN1 485 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 ICKQ9UPZ9 632 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 CHMP2BQ9UQN3 213 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 VPS9D1Q9Y2B5 631 aa24.28■■□□□ 1.48
HTATSF1-203ENST00000448450 LRRK2Q5S007 2527 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 TLCD2A6NGC4 264 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 KPNA5O15131 536 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 RAD51CO43502 376 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 NELFEP18615 380 aaKnown RBP24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 SLC1A2P43004 574 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 ARL4DP49703 201 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 MPP1Q00013 466 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 KCNAB1Q14722 419 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 MAATS1Q7Z4T9 603 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 CALML6Q8TD86 181 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 ZNF592Q92610 1267 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 CD180Q99467 661 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 FBXO5Q9UKT4 447 aa24.27■■□□□ 1.48
HTATSF1-203ENST00000448450 FAM187AA6NFU0 413 aa24.26■■□□□ 1.47
HTATSF1-203ENST00000448450 E5RI56 91 aa24.26■■□□□ 1.47
HTATSF1-203ENST00000448450 H3BMM5 538 aa24.26■■□□□ 1.47
HTATSF1-203ENST00000448450 SMAPO00193 183 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms