RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ZIC1Q15915 447 aa27.34■■□□□ 1.97
CBX4-202ENST00000448310 ZNF385CQ66K41 422 aaPredicted RBP27.34■■□□□ 1.97
CBX4-202ENST00000448310 ATG4AQ8WYN0 398 aa27.34■■□□□ 1.97
CBX4-202ENST00000448310 OR2A14Q96R47 310 aa27.34■■□□□ 1.97
CBX4-202ENST00000448310 NUDT9Q9BW91 350 aa27.34■■□□□ 1.97
CBX4-202ENST00000448310 LUZP4Q9P127 313 aa27.34■■□□□ 1.97
CBX4-202ENST00000448310 PLAGL1Q9UM63 463 aa27.34■■□□□ 1.97
CBX4-202ENST00000448310 SPTBN1Q01082 2364 aaKnown RBP27.34■■□□□ 1.97
CBX4-202ENST00000448310 BLACEA4D250 179 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 MIF4GDA9UHW6 222 aaKnown RBP27.33■■□□□ 1.97
CBX4-202ENST00000448310 PSMD3O43242 534 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 VPS4BO75351 444 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 FTH1P02794 183 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 PSMA3P25788 255 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 SHMT2P34897 504 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 ATP1A4Q13733 1029 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 GPR135Q8IZ08 494 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 N4BP2L2Q92802 583 aaPredicted RBP27.33■■□□□ 1.97
CBX4-202ENST00000448310 DESI2Q9BSY9 194 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 SPRTNQ9H040 489 aaPredicted RBP27.33■■□□□ 1.97
CBX4-202ENST00000448310 IMPACTQ9P2X3 320 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 VPS4AQ9UN37 437 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 ZNF451Q9Y4E5 1061 aa27.33■■□□□ 1.97
CBX4-202ENST00000448310 PRRC2CQ9Y520 2896 aaKnown RBP27.32■■□□□ 1.96
CBX4-202ENST00000448310 C9J4A7 227 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 BHMG1C9JSJ3 638 aaPredicted RBP27.32■■□□□ 1.96
CBX4-202ENST00000448310 OR1I1O60431 355 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 SORBS2O94875 1100 aaKnown RBP27.32■■□□□ 1.96
CBX4-202ENST00000448310 CTSBP07858 339 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 CHRM5P08912 532 aaPredicted RBP27.32■■□□□ 1.96
CBX4-202ENST00000448310 CBSLP0DN79 551 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 GP1BBP13224 206 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 AGXTP21549 392 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 CBSP35520 551 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 CSE1LP55060 971 aaKnown RBP27.32■■□□□ 1.96
CBX4-202ENST00000448310 SYTL3Q4VX76 610 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 C1orf189Q5VU69 101 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 PACS1Q6VY07 963 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 SYCE1Q8N0S2 351 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 DNAAF3Q8N9W5 541 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 OR13J1Q8NGT2 312 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 FLVCR1-AS1Q8TAF5 88 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 BAG1Q99933 345 aaPredicted RBP27.32■■□□□ 1.96
CBX4-202ENST00000448310 MFRPQ9BY79 579 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 SLC2A6Q9UGQ3 507 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 ICE1Q9Y2F5 2266 aa27.32■■□□□ 1.96
CBX4-202ENST00000448310 ESPL1Q14674 2120 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 SLC5A10A0PJK1 596 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 QSOX1O00391 747 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 OR2B3O76000 313 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 HBQ1P09105 142 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 OTX2P32243 289 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 GABRA4P48169 554 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 RAPSNQ13702 412 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 PRR30Q53SZ7 412 aaPredicted RBP27.31■■□□□ 1.96
CBX4-202ENST00000448310 LINC00523Q86TU6 105 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 TMEM139Q8IV31 216 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 TBC1D21Q8IYX1 336 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 HDAC10Q969S8 669 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.31■■□□□ 1.96
CBX4-202ENST00000448310 TCTN2Q96GX1 697 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 PSMG3-AS1Q96PY0 264 aa27.31■■□□□ 1.96
CBX4-202ENST00000448310 DPH2Q9BQC3 489 aaPredicted RBP27.31■■□□□ 1.96
CBX4-202ENST00000448310 ANKRD12Q6UB98 2062 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 H3BMH7 237 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 KIF5AQ12840 1032 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 CDH17Q12864 832 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 MLIPQ5VWP3 458 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 MED25Q71SY5 747 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 TMEM102Q8N9M5 508 aaPredicted RBP27.3■■□□□ 1.96
CBX4-202ENST00000448310 GALNT11Q8NCW6 608 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 OR5K2Q8NHB8 316 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 ETNK1Q9HBU6 452 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 POLG2Q9UHN1 485 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 PADI2Q9Y2J8 665 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 MAP4K5Q9Y4K4 846 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 CAPN6Q9Y6Q1 641 aa27.3■■□□□ 1.96
CBX4-202ENST00000448310 A0A0J9YY10 115 aa27.29■■□□□ 1.96
CBX4-202ENST00000448310 KLF7O75840 302 aaPredicted RBP27.29■■□□□ 1.96
CBX4-202ENST00000448310 GOT2P00505 430 aaKnown RBP27.29■■□□□ 1.96
CBX4-202ENST00000448310 OR56A5P0C7T3 313 aa27.29■■□□□ 1.96
CBX4-202ENST00000448310 PEBP1P30086 187 aaKnown RBP27.29■■□□□ 1.96
CBX4-202ENST00000448310 GRIA1P42261 906 aa27.29■■□□□ 1.96
CBX4-202ENST00000448310 RAB43Q86YS6 212 aa27.29■■□□□ 1.96
CBX4-202ENST00000448310 FAM20CQ8IXL6 584 aa27.29■■□□□ 1.96
CBX4-202ENST00000448310 HES6Q96HZ4 224 aa27.29■■□□□ 1.96
CBX4-202ENST00000448310 GPR83Q9NYM4 423 aa27.29■■□□□ 1.96
CBX4-202ENST00000448310 G3BP2Q9UN86 482 aaKnown RBP27.29■■□□□ 1.96
CBX4-202ENST00000448310 PCDHGB7Q9Y5F8 929 aa27.29■■□□□ 1.96
CBX4-202ENST00000448310 ISM1B1AKI9 464 aa27.28■■□□□ 1.96
CBX4-202ENST00000448310 DPM1O60762 260 aa27.28■■□□□ 1.96
CBX4-202ENST00000448310 RRADP55042 308 aa27.28■■□□□ 1.96
CBX4-202ENST00000448310 FOXL2P58012 376 aa27.28■■□□□ 1.96
CBX4-202ENST00000448310 SLC9A5Q14940 896 aa27.28■■□□□ 1.96
CBX4-202ENST00000448310 JMJD6Q6NYC1 403 aaPredicted RBP27.28■■□□□ 1.96
CBX4-202ENST00000448310 PPP1R21Q6ZMI0 780 aa27.28■■□□□ 1.96
CBX4-202ENST00000448310 PRUNE1Q86TP1 453 aa27.28■■□□□ 1.96
CBX4-202ENST00000448310 Q8NA96 180 aa27.28■■□□□ 1.96
CBX4-202ENST00000448310 GLIS1Q8NBF1 620 aa27.28■■□□□ 1.96
CBX4-202ENST00000448310 ZNF778Q96MU6 729 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms