RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 DNAJC16Q9Y2G8 782 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 STYXL1Q9Y6J8 313 aa4.8□□□□□ -1.64
SDCBP-205ENST00000447267 HCFC1P51610 2035 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 A0A0A6YYK5 440 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 UBA6A0AVT1 1052 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 UBE2QL1A1L167 161 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 PRSS38A1L453 326 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 TYW5A2RUC4 315 aaKnown RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 SCRG1O75711 98 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 MOCS2O96007 188 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 C9P02748 559 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 KLK3P07288 261 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 EBLN1P0CF75 366 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 TMIGD3P0DMS9 266 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 IDEP14735 1019 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 CPA1P15085 419 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 ITGA2P17301 1181 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 SLC9A1P19634 815 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 ACTR1BP42025 376 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 GNPDA1P46926 289 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 TNFSF10P50591 281 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 ARSEP51690 589 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 PLK1P53350 603 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 ACTR1AP61163 376 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 ROM1Q03395 351 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 PMPCAQ10713 525 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 ILF3Q12906 894 aaKnown RBP eCLIP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 TOB2Q14106 344 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 DAZAP2Q15038 168 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 CACHD1Q5VU97 1274 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 SCARA5Q6ZMJ2 495 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 FAM92BQ6ZTR7 304 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 CHD1LQ86WJ1 897 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 PLXDC1Q8IUK5 500 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 TMEM126BQ8IUX1 230 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 CHERPQ8IWX8 916 aaKnown RBP4.79□□□□□ -1.64
SDCBP-205ENST00000447267 TTC30BQ8N4P2 665 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 GPATCH11Q8N954 259 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 MYRIPQ8NFW9 859 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 OR6K2Q8NGY2 324 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 CXorf40AQ8TE69 158 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 RNF139Q8WU17 664 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 RND1Q92730 232 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 CLIP3Q96DZ5 547 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 TNIP3Q96KP6 325 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 GPR137Q96N19 417 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 FIZ1Q96SL8 496 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 AGAP2Q99490 1192 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 SOX7Q9BT81 388 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 TIPINQ9BVW5 301 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 C1QTNF7Q9BXJ2 289 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 B4GALT6Q9UBX8 382 aa4.79□□□□□ -1.64
SDCBP-205ENST00000447267 TRAV17A0A0B4J275 112 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 CACNB4O00305 520 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 RASGRF2O14827 1237 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 AREL1O15033 823 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 TEX33O43247 280 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 GPRIN2O60269 458 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 ZNF821O75541 412 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 KLF7O75840 302 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 MTA2O94776 668 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 TOX4O94842 621 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 TSPAN12O95859 305 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 TNNC2P02585 160 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 FAM163BP0C2L3 166 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 UQCRC1P31930 480 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 MYL6P60660 151 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 NUCB1Q02818 461 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 HHEXQ03014 270 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 COL10A1Q03692 680 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 AIMP2Q13155 320 aaKnown RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 MFAP5Q13361 173 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 TTC38Q5R3I4 469 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 TTC22Q5TAA0 569 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 PRAMEF9Q5VWM5 478 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 MLIPQ5VWP3 458 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 KAZNQ674X7 775 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 RAP1GAP2Q684P5 730 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 HAUS3Q68CZ6 603 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 CXorf57Q6NSI4 855 aaKnown RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 FAM111BQ6SJ93 734 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 ISLR2Q6UXK2 745 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 USP45Q70EL2 814 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 TRAPPC11Q7Z392 1133 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 TTC7BQ86TV6 843 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 ZSCAN30Q86W11 494 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 LIX1LQ8IVB5 337 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 SMC5Q8IY18 1101 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 DSELQ8IZU8 1212 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 CCAR2Q8N163 923 aaKnown RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 PELI3Q8N2H9 469 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 MYCT1Q8N699 235 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 SLC22A8Q8TCC7 542 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 ANP32BQ92688 251 aaKnown RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 ZBED6CLQ96FA7 236 aaPredicted RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 THOC3Q96J01 351 aaKnown RBP4.78□□□□□ -1.64
SDCBP-205ENST00000447267 CCDC114Q96M63 670 aa4.78□□□□□ -1.64
SDCBP-205ENST00000447267 PLIN2Q99541 437 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms