RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 GCNT7Q6ZNI0 430 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 PIWIL3Q7Z3Z3 882 aaKnown RBP18.68■□□□□ 0.58
SDCBP-204ENST00000447182 RTN4RL1Q86UN2 441 aaPredicted RBP18.68■□□□□ 0.58
SDCBP-204ENST00000447182 KRTCAP2Q8N6L1 136 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 UBTD2Q8WUN7 234 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 NCLNQ969V3 563 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 B3GALT6Q96L58 329 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 ZNF641Q96N77 438 aaPredicted RBP18.68■□□□□ 0.58
SDCBP-204ENST00000447182 OR52E6Q96RD3 313 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 SEPT5Q99719 369 aaPredicted RBP18.68■□□□□ 0.58
SDCBP-204ENST00000447182 CD244Q9BZW8 370 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 GABARAPL1Q9H0R8 117 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 LRTM1Q9HBL6 345 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 MTRRQ9UBK8 725 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 MAN2B2Q9Y2E5 1009 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 WDR37Q9Y2I8 494 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 PCDHGA4Q9Y5G9 962 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 GLTPD2A6NH11 291 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 CBX4O00257 560 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 GPR39O43194 453 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 VNN2O95498 520 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 SERPINA1P01009 418 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 JUNDP17535 347 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 RPS3AP61247 264 aaKnown RBP18.68■□□□□ 0.58
SDCBP-204ENST00000447182 HMGCS1Q01581 520 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 PTPRRQ15256 657 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 SHQ1Q6PI26 577 aaKnown RBP18.68■□□□□ 0.58
SDCBP-204ENST00000447182 NCEH1Q6PIU2 408 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 SUSD1Q6UWL2 747 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 CHST9Q7L1S5 443 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 SETD9Q8NE22 299 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 NETO1Q8TDF5 533 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 TAMM41Q96BW9 452 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 PYURFQ96I23 114 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 REXO5Q96IC2 774 aaKnown RBP18.68■□□□□ 0.58
SDCBP-204ENST00000447182 CPPED1Q9BRF8 314 aaPredicted RBP18.68■□□□□ 0.58
SDCBP-204ENST00000447182 CIPCQ9C0C6 399 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 C1orf109Q9NX04 203 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 OPTCQ9UBM4 332 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 PCDHB14Q9Y5E9 798 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 HSPE1-MOB4S4R3N1 261 aa18.68■□□□□ 0.58
SDCBP-204ENST00000447182 COQ9O75208 318 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ANGPTL1O95841 491 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 EBLN1P0CF75 366 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ZNF7P17097 686 aaPredicted RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 PFKLP17858 780 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 NR4A1P22736 598 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 HMGCLP35914 325 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ATP5C1P36542 298 aaKnown RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 CXCR4P61073 352 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 VAC14Q08AM6 782 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 PPP1R8Q12972 351 aaKnown RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 GPR17Q13304 367 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 RAPSNQ13702 412 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 TRIM71Q2Q1W2 868 aaKnown RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 GTDC1Q4AE62 458 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 USP39Q53GS9 565 aaKnown RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 PTRHD1Q6GMV3 140 aaKnown RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 C17orf99Q6UX52 265 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 DNAJC14Q6Y2X3 702 aaPredicted RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 SLC24A5Q71RS6 500 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 LRRC8DQ7L1W4 858 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 DET1Q7L5Y6 550 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 BTLAQ7Z6A9 289 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 PHACTR4Q8IZ21 702 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 OR7A2PQ8NGA2 310 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 USP7Q93009 1102 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 CLPBQ9H078 707 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 KCNH6Q9H252 994 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 DUSP21Q9H596 190 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ZFP14Q9HCL3 533 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 FARSBQ9NSD9 589 aaKnown RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ATAD3AQ9NVI7 634 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 KLQ9UEF7 1012 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 DAPK2Q9UIK4 370 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 INTS6Q9UL03 887 aaKnown RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ZNF490Q9ULM2 529 aaPredicted RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ANGPTL3Q9Y5C1 460 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 A0A096LPI6 279 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 KRBA1A5PL33 1030 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 FFAR3O14843 346 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 AREL1O15033 823 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 GPR42O15529 346 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 SEC22BO75396 215 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ARHGEF15O94989 841 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 GUCA1CO95843 209 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 HPCAL1P37235 193 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ARPP19P56211 112 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 HUNKP57058 714 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ZNF177Q13360 481 aaPredicted RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 TAF1CQ15572 869 aaPredicted RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 FAM171A1Q5VUB5 890 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 SLCO6A1Q86UG4 719 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 RGL4Q8IZJ4 473 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ABI1Q8IZP0 508 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 C2orf69Q8N8R5 385 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 RORBQ92753 470 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 FAM120BQ96EK7 910 aaKnown RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 TTLL2Q9BWV7 592 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms