RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 TARDBPQ13148 414 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRDM15-206ENST00000447016 KCTD19Q17RG1 926 aaPredicted RBP13.11□□□□□ -0.31
PRDM15-206ENST00000447016 DCBLD1Q8N8Z6 715 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 CMASQ8NFW8 434 aaPredicted RBP13.11□□□□□ -0.31
PRDM15-206ENST00000447016 KLHL6Q8WZ60 621 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 ITFG2Q969R8 447 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 GPR20Q99678 358 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 HTATIP2Q9BUP3 242 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 NKX1-2Q9UD57 310 aaPredicted RBP13.11□□□□□ -0.31
PRDM15-206ENST00000447016 ENTPD6O75354 484 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 RBMXL2O75526 392 aaKnown RBP13.11□□□□□ -0.31
PRDM15-206ENST00000447016 ITGA10O75578 1167 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 CAPN15O75808 1086 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 POU2F1P14859 743 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 DSC3Q14574 896 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 ZNF773Q6PK81 442 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 CFAP52Q8N1V2 620 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 TFAP2BQ92481 460 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 TMBIM1Q969X1 311 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 RFT1Q96AA3 541 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 DPAGT1Q9H3H5 408 aa13.11□□□□□ -0.31
PRDM15-206ENST00000447016 EVLQ9UI08 416 aaPredicted RBP13.11□□□□□ -0.31
PRDM15-206ENST00000447016 FAM189A1O60320 539 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 INMTO95050 263 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 NPPAP01160 153 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 ZNF806P0C7X5 589 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 TFPIP10646 304 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 CMPK1P30085 196 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 YAP1P46937 504 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 GBX2P52951 348 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 DAOAP59103 153 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 ZNF155Q12901 538 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 RFTN1Q14699 578 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 ZNF548Q8NEK5 533 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 COL21A1Q96P44 957 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 PCDHGB6Q9Y5F9 930 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 DIP2CQ9Y2E4 1556 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 PDPK1O15530 556 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 PI15O43692 258 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 ABCB7O75027 752 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 FPR1P21462 350 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 ERP29P30040 261 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 CD52P31358 61 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 CADM2Q8N3J6 435 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 ZNF615Q8N8J6 731 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 SNIP1Q8TAD8 396 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 AZIN2Q96A70 460 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 NTPCRQ9BSD7 190 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 LGR4Q9BXB1 951 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 COLEC10Q9Y6Z7 277 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 DCCP43146 1447 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 ISPDA4D126 451 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 OR2AT4A6NND4 320 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 CLDN4O14493 209 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 MT-CYBP00156 380 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 PRH1P02810 166 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 NT5EP21589 574 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 ECHS1P30084 290 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 CORO1AP31146 461 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 CBFBQ13951 182 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 SYT16Q17RD7 645 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 POM121L1PQ3SYA9 428 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 TAC4Q86UU9 113 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 LGI4Q8N135 537 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 INO80EQ8NBZ0 244 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 GEMIN6Q8WXD5 167 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 C12orf43Q96C57 262 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 PDZD7Q9H5P4 517 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 FNIP2Q9P278 1114 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 NUP50Q9UKX7 468 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 DUXAA6NLW8 204 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 PRNPP04156 253 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 GRK6P43250 576 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 XKP51811 444 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 INHBEP58166 350 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 STXBP1P61764 594 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 CSTF1Q05048 431 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 GRIK5Q16478 980 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
PRDM15-206ENST00000447016 TIFABQ6ZNK6 161 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 TOMM5Q8N4H5 51 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 PREBQ9HCU5 417 aa13.1□□□□□ -0.31
PRDM15-206ENST00000447016 CPSF4LA6NMK7 179 aaKnown RBP13.09□□□□□ -0.31
PRDM15-206ENST00000447016 HLA-DPB1P04440 258 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 GJB1P08034 283 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 MTHFD1P11586 935 aaKnown RBP13.09□□□□□ -0.31
PRDM15-206ENST00000447016 MAP2K5Q13163 448 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 FAM189A2Q15884 450 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 SLC30A6Q6NXT4 461 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 PARGQ86W56 976 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 UBE2J2Q8N2K1 259 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 OR6K2Q8NGY2 324 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 OR10G6Q8NH81 332 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 SCGB3A2Q96PL1 93 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 MFSD1Q9H3U5 465 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 PLEKHA1Q9HB21 404 aa13.09□□□□□ -0.31
PRDM15-206ENST00000447016 MARK1Q9P0L2 795 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms