RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 LRRC58Q96CX6 371 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 ASB9Q96DX5 294 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 MED8Q96G25 268 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 COQ10AQ96MF6 247 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 ANKRD27Q96NW4 1050 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 VPS35Q96QK1 796 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 MYADMQ96S97 322 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 CDCA3Q99618 268 aaPredicted RBP9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 ZNF184Q99676 751 aaPredicted RBP9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 HOPXQ9BPY8 73 aaPredicted RBP9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 NTMT1Q9BV86 223 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 BRINP2Q9C0B6 783 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 OR2AG1Q9H205 316 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 SZT2Q5T011 3432 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC28A1O00337 649 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 QSOX1O00391 747 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 MANBAO00462 879 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLCO2B1O94956 709 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 STAMBPO95630 424 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 PSMC3P17980 439 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 EPORP19235 508 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 PEX2P28328 305 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 PDHA2P29803 388 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 HALP42357 657 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 HYAL1Q12794 435 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 RCAN2Q14206 197 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 RBBP5Q15291 538 aaKnown RBP9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 ATAT1Q5SQI0 421 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 NEK5Q6P3R8 708 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 PARM1Q6UWI2 310 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 HACD2Q6Y1H2 254 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 ERN2Q76MJ5 926 aaKnown RBP9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 IFNEQ86WN2 208 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 CHPFQ8IZ52 775 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 RGL4Q8IZJ4 473 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 TCAIMQ8N3R3 496 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 CXorf40AQ8TE69 158 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 PPP3R2Q96LZ3 170 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 LRGUKQ96M69 825 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 RPP25Q9BUL9 199 aaKnown RBP9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 ELOVL6Q9H5J4 265 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 COPS7BQ9H9Q2 264 aaPredicted RBP9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRPV4Q9HBA0 871 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 PRSS16Q9NQE7 514 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 OBP2AQ9NY56 170 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLAMF8Q9P0V8 285 aa9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 SUCOQ9UBS9 1254 aaKnown RBP9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 EIF3LQ9Y262 564 aaKnown RBP9.3□□□□□ -0.92
COL6A4P1-201ENST00000446690 FAM234BA2RU67 622 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 C1QTNF3-AMACRE9PGA6 284 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 H0Y858 1186 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 PSMD11O00231 422 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC16A5O15375 505 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 PDYNP01213 254 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 KRT6AP02538 564 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 KRT6BP04259 564 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 FESP07332 822 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 ACADSP16219 412 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 GGT5P36269 586 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 P2RY2P41231 377 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 BDKRB1P46663 353 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 GNPDA1P46926 289 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 ZFP36L2P47974 494 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 SOX9P48436 509 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 KRT6CP48668 564 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 DGKQP52824 942 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 CDKL1Q00532 357 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 FCHO2Q0JRZ9 810 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 GRIK2Q13002 908 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 PRKG2Q13237 762 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 SP140Q13342 867 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 CCSMST1Q4G0I0 132 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 CDKL4Q5MAI5 379 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 THEMIS2Q5TEJ8 643 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 ANKRD54Q6NXT1 300 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 METTL2BQ6P1Q9 378 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 C8orf82Q6P1X6 216 aaPredicted RBP9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC2A7Q6PXP3 512 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 LRRC70Q7Z2Q7 622 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 DSG4Q86SJ6 1040 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 SELENOMQ8WWX9 145 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 FGF14Q92915 247 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 MRPL38Q96DV4 380 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 LRTM1Q9HBL6 345 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 SLC52A3Q9NQ40 469 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 ZIM2Q9NZV7 527 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 CD300AQ9UGN4 299 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 EGFL7Q9UHF1 273 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 TRPS1Q9UHF7 1281 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 CNOT6Q9ULM6 557 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 PSMD13Q9UNM6 376 aa9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 ZNF106Q9H2Y7 1883 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-201ENST00000446690 ASPDHA6ND91 283 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 ARHGEF33A8MVX0 844 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 NME4O00746 187 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 AREL1O15033 823 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 AHCYL1O43865 530 aa9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 RSL1D1O76021 490 aaKnown RBP9.28□□□□□ -0.92
COL6A4P1-201ENST00000446690 SOD1P00441 154 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms