RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 DNAJC21Q5F1R6 531 aaKnown RBP14.29□□□□□ -0.12
USE1-202ENST00000445667 ZNF789Q5FWF6 425 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 RNASEH2BQ5TBB1 312 aaKnown RBP14.29□□□□□ -0.12
USE1-202ENST00000445667 PRAMEF17Q5VTA0 474 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 CYB5D1Q6P9G0 228 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 CENPUQ71F23 418 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 TRIM73Q86UV7 250 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 CREG2Q8IUH2 290 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 KLHL7Q8IXQ5 586 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 CARFQ8N187 725 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 LPGAT1Q92604 370 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 FAM136AQ96C01 138 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 ZNF501Q96CX3 271 aaPredicted RBP14.29□□□□□ -0.12
USE1-202ENST00000445667 WBP1Q96G27 269 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 SLC45A3Q96JT2 553 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 TRAPPC9Q96Q05 1148 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 PANX3Q96QZ0 392 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 TCF12Q99081 682 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 TUBB2BQ9BVA1 445 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 SEMA4CQ9C0C4 833 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 AKIRIN1Q9H9L7 192 aaPredicted RBP14.29□□□□□ -0.12
USE1-202ENST00000445667 KCND1Q9NSA2 647 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 GALPQ9UBC7 116 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 ASIC3Q9UHC3 531 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 PCYOX1Q9UHG3 505 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 BTRCQ9Y297 605 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 MRPS18BQ9Y676 258 aaKnown RBP14.29□□□□□ -0.12
USE1-202ENST00000445667 SAR1BQ9Y6B6 198 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 MAD1L1Q9Y6D9 718 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 ATMQ13315 3056 aa14.29□□□□□ -0.12
USE1-202ENST00000445667 ZCWPW2A0A1B0GU75 182 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 DNALI1O14645 258 aaPredicted RBP14.28□□□□□ -0.12
USE1-202ENST00000445667 PFDN6O15212 129 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 NIPSNAP2O75323 286 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 C1QL1O75973 258 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 S1PR4O95977 384 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 UGT2B7P16662 529 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 OGNP20774 298 aaKnown RBP14.28□□□□□ -0.12
USE1-202ENST00000445667 THOC5Q13769 683 aaKnown RBP14.28□□□□□ -0.12
USE1-202ENST00000445667 PTK6Q13882 451 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 TMED2Q15363 201 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 TBR1Q16650 682 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 KYNUQ16719 465 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 ARMC3Q5W041 872 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 SPESP1Q6UW49 350 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 OTOAQ7RTW8 1153 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 TMEM135Q86UB9 458 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 BPHLQ86WA6 291 aaPredicted RBP14.28□□□□□ -0.12
USE1-202ENST00000445667 CILP2Q8IUL8 1156 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 C2orf73Q8N5S3 287 aaPredicted RBP14.28□□□□□ -0.12
USE1-202ENST00000445667 EXD3Q8N9H8 876 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 FCRL4Q96PJ5 515 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 OR2A14Q96R47 310 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 PITPNM3Q9BZ71 974 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 TSR3Q9UJK0 312 aaKnown RBP14.28□□□□□ -0.12
USE1-202ENST00000445667 CROTQ9UKG9 612 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 PADI1Q9ULC6 663 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 RUVBL2Q9Y230 463 aaKnown RBP14.28□□□□□ -0.12
USE1-202ENST00000445667 NFS1Q9Y697 457 aa14.28□□□□□ -0.12
USE1-202ENST00000445667 CTAGE9A4FU28 777 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 ZNF891A8MT65 544 aaPredicted RBP14.27□□□□□ -0.13
USE1-202ENST00000445667 ISM1B1AKI9 464 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 TMEM150CB9EJG8 249 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 KPNA5O15131 536 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 FANCGO15287 622 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 BANF1O75531 89 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 SCRG1O75711 98 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 ITGB2P05107 769 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 CCNYL3P0C7X3 344 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 PRKAR1AP10644 381 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 CHRM3P20309 590 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 IVDP26440 423 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 PEBP1P30086 187 aaKnown RBP14.27□□□□□ -0.13
USE1-202ENST00000445667 DLSTP36957 453 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 CTBP1Q13363 440 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 GRB7Q14451 532 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 PLEKHS1Q5SXH7 462 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 RNF187Q5TA31 235 aaPredicted RBP14.27□□□□□ -0.13
USE1-202ENST00000445667 IZUMO3Q5VZ72 239 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 ZNF470Q6ECI4 717 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 FAM199XQ6PEV8 388 aaPredicted RBP14.27□□□□□ -0.13
USE1-202ENST00000445667 UNC5DQ6UXZ4 953 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 HOOK3Q86VS8 718 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 TMEM126BQ8IUX1 230 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 SPNS2Q8IVW8 549 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 DENND6AQ8IWF6 608 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 FAM20CQ8IXL6 584 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 FLVCR1-AS1Q8TAF5 88 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 GSDMBQ8TAX9 411 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 SKA2Q8WVK7 121 aaPredicted RBP14.27□□□□□ -0.13
USE1-202ENST00000445667 SLCO2A1Q92959 643 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 IL17FQ96PD4 163 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 ARHGAP9Q9BRR9 750 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 EFHD1Q9BUP0 239 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 LHX9Q9NQ69 397 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 FBXO6Q9NRD1 293 aaPredicted RBP14.27□□□□□ -0.13
USE1-202ENST00000445667 C20orf96Q9NUD7 363 aaPredicted RBP14.27□□□□□ -0.13
USE1-202ENST00000445667 OR6C2Q9NZP2 312 aa14.27□□□□□ -0.13
USE1-202ENST00000445667 KRT87PA6NCN2 255 aa14.26□□□□□ -0.13
USE1-202ENST00000445667 KDM1AO60341 852 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms