RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	ANKRD19P	Q9H560	264 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	NIPAL2	Q9H841	368 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ASCL3	Q9NQ33	180 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	DUS2	Q9NX74	493 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	RCOR3	Q9P2K3	495 aa	Predicted RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	MYEF2	Q9P2K5	600 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	SLC17A7	Q9P2U7	560 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	SRRD	Q9UH36	339 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	WASF3	Q9UPY6	502 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	FAM205A	Q6ZU69	1335 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CNTNAP1	P78357	1384 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	PTPRF	P10586	1907 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329		A0A1B0GVM2	712 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	FAM74A7	A6NL05	159 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TMEM210	A6NLX4	147 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ARVCF	O00192	962 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	HPGDS	O60760	199 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	PLS3	P13797	630 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ADRB3	P13945	408 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TPH1	P17752	444 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CRABP1	P29762	137 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CDKN1C	P49918	316 aa	Predicted RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	GTF2I	P78347	998 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ARHGAP19	Q14CB8	494 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	FAM74A3	Q4VXF1	159 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	PTRHD1	Q6GMV3	140 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	XRRA1	Q6P2D8	792 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ZNF773	Q6PK81	442 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	C16orf89	Q6UX73	402 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	SLC26A9	Q7LBE3	791 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ADGRD2	Q7Z7M1	963 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	LIX1L	Q8IVB5	337 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	GPR65	Q8IYL9	337 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CERS5	Q8N5B7	392 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	PHF10	Q8WUB8	498 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	LRTOMT	Q8WZ04	291 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CRELD1	Q96HD1	420 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	NSMCE2	Q96MF7	247 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ZSWIM3	Q96MP5	696 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CLUHP3	Q96NS8	147 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	DCLRE1C	Q96SD1	692 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TREX2	Q9BQ50	279 aa	Predicted RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	EBF4	Q9BQW3	602 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	COA1	Q9GZY4	146 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	PUS7L	Q9H0K6	701 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	KAT8	Q9H7Z6	458 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TM9SF3	Q9HD45	589 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TREM1	Q9NP99	234 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	KLHL1	Q9NR64	748 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TLR9	Q9NR96	1032 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	GDE1	Q9NZC3	331 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	IFT80	Q9P2H3	777 aa	Predicted RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ITGA11	Q9UKX5	1188 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	GPR55	Q9Y2T6	319 aa	Predicted RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CDY2A	Q9Y6F7	541 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TCRBV5S4A2T	A0A5A2	114 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	VSTM5	A8MXK1	200 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329		J3QW42	95 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329		L7N2F9	121 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	NFIB	O00712	420 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	PMPCB	O75439	489 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	CREG1	O75629	220 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	UBXN7	O94888	489 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	HSPA4L	O95757	839 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	GSR	P00390	522 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	C1QB	P02746	253 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	HNF1A	P20823	631 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	HTR1B	P28222	390 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	MAT2A	P31153	395 aa	Known RBP	6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	KIR3DL2	P43630	455 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	TOB1	P50616	345 aa	Predicted RBP	6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	HLCS	P50747	726 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	CDH6	P55285	790 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	PRMT2	P55345	433 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	CAV1	Q03135	178 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	TAP2	Q03519	686 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	STX4	Q12846	297 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	PDK2	Q15119	407 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	BMT2	Q1RMZ1	405 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	DCAF12L1	Q5VU92	463 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	LIPJ	Q5W064	366 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	MSANTD2	Q6P1R3	559 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	ADGRD1	Q6QNK2	874 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	ATRAID	Q6UW56	229 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	SV2A	Q7L0J3	742 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	PIWIL4	Q7Z3Z4	852 aa	Known RBP	6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	TCTE3	Q8IZS6	198 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	ZNF276	Q8N554	614 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	C12orf45	Q8N5I9	185 aa	Predicted RBP	6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	NAT16	Q8N8M0	369 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	KBTBD8	Q8NFY9	601 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	MCFD2	Q8NI22	146 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	PHOSPHO1	Q8TCT1	267 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	NTAN1	Q96AB6	310 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	TIFA	Q96CG3	184 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	TMEM41A	Q96HV5	264 aa		6.67	□□□□□ -1.34
TRIM6-205	ENST00000445329	FBXL20	Q96IG2	436 aa		6.67	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms