RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 C3orf38Q5JPI3 329 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 UBAP2Q5T6F2 1119 aaKnown RBP11.97□□□□□ -0.49
USP1-203ENST00000442679 GRTP1Q5TC63 336 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 FOXR1Q6PIV2 292 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 PAQR3Q6TCH7 311 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 CYHR1Q6ZMK1 362 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 FAM92BQ6ZTR7 304 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 DCUN1D3Q8IWE4 304 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 FBXO39Q8N4B4 442 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 WDR36Q8NI36 951 aaKnown RBP11.97□□□□□ -0.49
USP1-203ENST00000442679 EEF1AKMT1Q8WVE0 214 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 CYTH2Q99418 400 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 OLFM1Q99784 485 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 CMKLR1Q99788 373 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 POLR1BQ9H9Y6 1135 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 AKAP7Q9P0M2 348 aaPredicted RBP11.97□□□□□ -0.49
USP1-203ENST00000442679 CIDEBQ9UHD4 219 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 PLAGL1Q9UM63 463 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 SATB2Q9UPW6 733 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 ICKQ9UPZ9 632 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 MTO1Q9Y2Z2 717 aaKnown RBP11.97□□□□□ -0.49
USP1-203ENST00000442679 AK5Q9Y6K8 562 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 AKAP13Q12802 2813 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 ASPMQ8IZT6 3477 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 CEP295Q9C0D2 2601 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 WDFY3Q8IZQ1 3526 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 A0A1W2PNU3 283 aaPredicted RBP11.96□□□□□ -0.49
USP1-203ENST00000442679 GSAPA4D1B5 854 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 BTN3A3O00478 584 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 BTN3A1O00481 513 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 HGSO14964 777 aaPredicted RBP11.96□□□□□ -0.49
USP1-203ENST00000442679 KIF1CO43896 1103 aaKnown RBP11.96□□□□□ -0.49
USP1-203ENST00000442679 PSIP1O75475 530 aaKnown RBP11.96□□□□□ -0.49
USP1-203ENST00000442679 RASSF9O75901 435 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 FAM155BO75949 473 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 CSTF2P33240 577 aaKnown RBP eCLIP11.96□□□□□ -0.49
USP1-203ENST00000442679 SPRP35270 261 aaPredicted RBP11.96□□□□□ -0.49
USP1-203ENST00000442679 BDKRB1P46663 353 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 LSSP48449 732 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 PGGT1BP53609 377 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 SLC12A2P55011 1212 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 TAS2R39P59534 338 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 IL2P60568 153 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 PPP1CAP62136 330 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 GABREP78334 506 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 EIF3IQ13347 325 aaKnown RBP11.96□□□□□ -0.49
USP1-203ENST00000442679 GRB7Q14451 532 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 RTP5Q14D33 572 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.494e-6■■■■□ 20.7
USP1-203ENST00000442679 CCSMST1Q4G0I0 132 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 CACHD1Q5VU97 1274 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 PIWIL4Q7Z3Z4 852 aaKnown RBP11.96□□□□□ -0.49
USP1-203ENST00000442679 ARHGAP22Q7Z5H3 698 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 ADGRF3Q8IZF5 1079 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 EIF1ADQ8N9N8 165 aaKnown RBP11.96□□□□□ -0.49
USP1-203ENST00000442679 AGBL5Q8NDL9 886 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 MAGEC3Q8TD91 643 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 ASB11Q8WXH4 323 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 GATA6Q92908 595 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 RAD51AP1Q96B01 352 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 NXPE2Q96DL1 559 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 MRRFQ96E11 262 aaKnown RBP11.96□□□□□ -0.49
USP1-203ENST00000442679 VPS39Q96JC1 886 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 RBBP8Q99708 897 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 ANKZF1Q9H8Y5 726 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 OR6C2Q9NZP2 312 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 SLC39A10Q9ULF5 831 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 LOXL2Q9Y4K0 774 aa11.96□□□□□ -0.49
USP1-203ENST00000442679 PTPRBP23467 1997 aa11.96□□□□□ -0.5
USP1-203ENST00000442679 PMS2P1A4D2B8 440 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 GFYI3L273 518 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 MATN2O00339 956 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 RASGRF2O14827 1237 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 PLD2O14939 933 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 TOX3O15405 576 aaPredicted RBP11.95□□□□□ -0.5
USP1-203ENST00000442679 ZBTB14O43829 449 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 CATP04040 527 aaKnown RBP11.95□□□□□ -0.5
USP1-203ENST00000442679 JMJD7P0C870 316 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 HGFP14210 728 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 MAP4P27816 1152 aaKnown RBP11.95□□□□□ -0.5
USP1-203ENST00000442679 PKLRP30613 574 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 SEPHS1P49903 392 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 RAB28P51157 221 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 PMS2P54278 862 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 POU4F1Q01851 419 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 CYP4F3Q08477 520 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 USP10Q14694 798 aaKnown RBP11.95□□□□□ -0.5
USP1-203ENST00000442679 LRRC8EQ6NSJ5 796 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 TRMT10CQ7L0Y3 403 aaKnown RBP11.95□□□□□ -0.5
USP1-203ENST00000442679 PRSS42Q7Z5A4 293 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 GSPT2Q8IYD1 628 aaKnown RBP11.95□□□□□ -0.5
USP1-203ENST00000442679 MYO1HQ8N1T3 1032 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 UHMK1Q8TAS1 419 aaKnown RBP11.95□□□□□ -0.5
USP1-203ENST00000442679 LINGO1Q96FE5 620 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 TSPAN17Q96FV3 270 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 IL17FQ96PD4 163 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 CD180Q99467 661 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 FUT8Q9BYC5 575 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 ACSS3Q9H6R3 686 aa11.95□□□□□ -0.5
USP1-203ENST00000442679 PCDHGA8Q9Y5G5 932 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms