RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SNRNP200O75643 2136 aaKnown RBP14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 A8MU76 341 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 RASSF9O75901 435 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 MPC1LP0DKB6 136 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 FGF3P11487 239 aaPredicted RBP14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 HGFP14210 728 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 ITIH1P19827 911 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 CD82P27701 267 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 SSTR1P30872 391 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 MAGEA4P43358 317 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 RAB15P59190 212 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 MC2RQ01718 297 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 KLHL38Q2WGJ6 581 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 DNTTIP2Q5QJE6 756 aaKnown RBP14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 C3orf62Q6ZUJ4 267 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 RELL1Q8IUW5 271 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 ADGRF3Q8IZF5 1079 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 BMPERQ8N8U9 685 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 CD200R1Q8TD46 325 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 RAD51AP1Q96B01 352 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 TEFMQ96QE5 360 aaKnown RBP14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 GPR21Q99679 349 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 DDA1Q9BW61 102 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 POMT2Q9UKY4 750 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 ZMIZ1Q9ULJ6 1067 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 ICKQ9UPZ9 632 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 TDRKHQ9Y2W6 561 aaKnown RBP14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 PCDHGA3Q9Y5H0 932 aa14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 URB1O60287 2271 aaKnown RBP14.59□□□□□ -0.07
CSNK1E-210ENST00000442216 MAP1BP46821 2468 aaKnown RBP14.58□□□□□ -0.07
CSNK1E-210ENST00000442216 ANKRD12Q6UB98 2062 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 PMS2P1A4D2B8 440 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 EFCAB7A8K855 629 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 C2orf74A8MZ97 194 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 TAF4O00268 1085 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 BTN3A3O00478 584 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 BTN3A1O00481 513 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 ZNF500O60304 480 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 PSIP1O75475 530 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 C1orf105O95561 183 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 F7P08709 466 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 TPBGLP0DKB5 382 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 CCL4P13236 92 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 NELFEP18615 380 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 POLR2CP19387 275 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 PKLRP30613 574 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 ETV5P41161 510 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 RAB28P51157 221 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 MAPK10P53779 464 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 PCBP4P57723 403 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 ACSBG2Q5FVE4 666 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 FAM45BPQ6NSW5 357 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 FAM92BQ6ZTR7 304 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 CCDC25Q86WR0 208 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 SIDT2Q8NBJ9 832 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 CFAP61Q8NHU2 1237 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 GIMAP7Q8NHV1 300 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 FAM45AQ8TCE6 357 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 SKA2Q8WVK7 121 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 FAM136AQ96C01 138 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 SLC41A2Q96JW4 573 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 MAP3K3Q99759 626 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 ZPBPQ9BS86 351 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 MENTQ9BUN1 341 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 ASPSCR1Q9BZE9 553 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 L2HGDHQ9H9P8 463 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 LRRC4CQ9HCJ2 640 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 C1GALT1Q9NS00 363 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 OCIAD1Q9NX40 245 aa14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 TRMT6Q9UJA5 497 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-210ENST00000442216 APC2O95996 2303 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 TCRBV9S1A1TA0A576 114 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 PIPSLA2A3N6 862 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 RASGRF2O14827 1237 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 TLX3O43711 291 aaPredicted RBP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 KIF1CO43896 1103 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 ZBTB11O95625 1053 aaPredicted RBP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 PRDX3P30048 256 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 SLC5A2P31639 672 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 STX2P32856 288 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 RGS4P49798 205 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 KPNA2P52292 529 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 GPX6P59796 221 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 PPP1CAP62136 330 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 TIAL1Q01085 375 aaKnown RBP eCLIP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 CUL1Q13616 776 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 GRB7Q14451 532 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 KIR2DS3Q14952 304 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 ST3GAL2Q16842 350 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 RBM20Q5T481 1227 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 CEACAM20Q6UY09 585 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 STRA8Q7Z7C7 330 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 BPHLQ86WA6 291 aaPredicted RBP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 ZC3HC1Q86WB0 502 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 FAM129CQ86XR2 697 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 RAB42Q8N4Z0 105 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 FBXO15Q8NCQ5 510 aaPredicted RBP14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 ZNF248Q8NDW4 579 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 HMGCLL1Q8TB92 370 aa14.57□□□□□ -0.08
CSNK1E-210ENST00000442216 USP7Q93009 1102 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms