RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 KMT5CQ86Y97 462 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 RELL1Q8IUW5 271 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 SIDT2Q8NBJ9 832 aaKnown RBP11.47□□□□□ -0.57
HSPG2-206ENST00000439717 CFAP61Q8NHU2 1237 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 SNIP1Q8TAD8 396 aaKnown RBP11.47□□□□□ -0.57
HSPG2-206ENST00000439717 FAM45AQ8TCE6 357 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 CD200R1Q8TD46 325 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 KLHL6Q8WZ60 621 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 FGF11Q92914 225 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 RAD51AP1Q96B01 352 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 NDNQ99608 321 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 GPR21Q99679 349 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 SLC30A3Q99726 388 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 L2HGDHQ9H9P8 463 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 OR6C2Q9NZP2 312 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 TRMT6Q9UJA5 497 aaKnown RBP11.47□□□□□ -0.57
HSPG2-206ENST00000439717 ICKQ9UPZ9 632 aa11.47□□□□□ -0.57
HSPG2-206ENST00000439717 TDRKHQ9Y2W6 561 aaKnown RBP11.47□□□□□ -0.57
HSPG2-206ENST00000439717 FRYQ5TBA9 3013 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 WDFY3Q8IZQ1 3526 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 TCRBV9S1A1TA0A576 114 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 PMS2P1A4D2B8 440 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 EFCAB7A8K855 629 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 C2orf74A8MZ97 194 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 BTN3A3O00478 584 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 BTN3A1O00481 513 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 NVLO15381 856 aaKnown RBP11.46□□□□□ -0.57
HSPG2-206ENST00000439717 TPBGLP0DKB5 382 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 MPC1LP0DKB6 136 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 FGF3P11487 239 aaPredicted RBP11.46□□□□□ -0.57
HSPG2-206ENST00000439717 CCL4P13236 92 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 ITIH1P19827 911 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 STX2P32856 288 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 RGS4P49798 205 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 RAB28P51157 221 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 KPNA2P52292 529 aaKnown RBP11.46□□□□□ -0.57
HSPG2-206ENST00000439717 RAB15P59190 212 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 GPX6P59796 221 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 PPP1CAP62136 330 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 MC2RQ01718 297 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 KLHL38Q2WGJ6 581 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 TMEM164Q5U3C3 297 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 HECTD2Q5U5R9 776 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 CYB5D1Q6P9G0 228 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 CAPN12Q6ZSI9 719 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 IFT20Q8IY31 132 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 ADGRF3Q8IZF5 1079 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 RAB42Q8N4Z0 105 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 BMPERQ8N8U9 685 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 GIMAP7Q8NHV1 300 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 IFT81Q8WYA0 676 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 TAAR9Q96RI9 348 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 FMO2Q99518 471 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 DDA1Q9BW61 102 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 RAB11FIP5Q9BXF6 653 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 TWSG1Q9GZX9 223 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 XKR8Q9H6D3 395 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 LRRC4CQ9HCJ2 640 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 FBXO8Q9NRD0 319 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 C1GALT1Q9NS00 363 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 SLC17A6Q9P2U8 582 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 POMT2Q9UKY4 750 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 VWA7Q9Y334 891 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 PCDHGA3Q9Y5H0 932 aa11.46□□□□□ -0.57
HSPG2-206ENST00000439717 PIPSLA2A3N6 862 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 GSAPA4D1B5 854 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 FAM159BA6NKW6 160 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 TAF4O00268 1085 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 RASGRF2O14827 1237 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 KIF1CO43896 1103 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 PSIP1O75475 530 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 CATP04040 527 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 CHRM5P08912 532 aaPredicted RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 NELFEP18615 380 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 FDXRP22570 491 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 CD82P27701 267 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 PRDX3P30048 256 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 PKLRP30613 574 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 ETV5P41161 510 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 SEPHS1P49903 392 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 MAPK10P53779 464 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 CDKN2DP55273 166 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 PCBP4P57723 403 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 TIAL1Q01085 375 aaKnown RBP eCLIP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 NAB1Q13506 487 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 GRB7Q14451 532 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 KIR2DS3Q14952 304 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 RBM20Q5T481 1227 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 DCAF12Q5T6F0 453 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 CYHR1Q6ZMK1 362 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 ZC3HC1Q86WB0 502 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 FAM129CQ86XR2 697 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 CPNE9Q8IYJ1 553 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 GPATCH11Q8N954 259 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 FBXO15Q8NCQ5 510 aaPredicted RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 USP7Q93009 1102 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 SLC41A2Q96JW4 573 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 TEFMQ96QE5 360 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 MAP3K3Q99759 626 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 CPNE1Q99829 537 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms