RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ABATP80404 500 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 LIPEQ05469 1076 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 GTF2H3Q13889 308 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 PLA2G4EQ3MJ16 856 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 KLHL12Q53G59 568 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 KCTD11Q693B1 232 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 ABI1Q8IZP0 508 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 CACTIN-AS1Q8N1I8 211 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 VPS37AQ8NEZ2 397 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.5■□□□□ 0.073e-18■■■■□ 25.9
DHFR-201ENST00000439211 PPP1R2P1Q96PQ5 205 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 PARK7Q99497 189 aaKnown RBP15.5■□□□□ 0.07
DHFR-201ENST00000439211 PEX16Q9Y5Y5 336 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 LRRC14BA6NHZ5 514 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 H3BMM5 538 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 AZIN1O14977 448 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 PIP5K1BO14986 540 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 KCNJ13O60928 360 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 TBX4P57082 545 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 EMX1Q04741 257 aaPredicted RBP15.5■□□□□ 0.07
DHFR-201ENST00000439211 PSMD5Q16401 504 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 AHSA2Q719I0 299 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 IFNL1Q8IU54 200 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 PARP16Q8N5Y8 322 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 GTF3C2Q8WUA4 911 aaPredicted RBP15.5■□□□□ 0.07
DHFR-201ENST00000439211 MUL1Q969V5 352 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 KCNA7Q96RP8 456 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 TMEM209Q96SK2 561 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 TMEM30AQ9NV96 361 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 TMEM181Q9P2C4 612 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 CFL2Q9Y281 166 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 A0A1W2PQH9 124 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 SLC1A7O00341 560 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 NME4O00746 187 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 RGS10O43665 173 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 AP2S1P53680 142 aaPredicted RBP15.5■□□□□ 0.07
DHFR-201ENST00000439211 CYP4F2P78329 520 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 CYP4F3Q08477 520 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 KCNAB2Q13303 367 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 IL18R1Q13478 541 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 GALEQ14376 348 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 PCBP1Q15365 356 aaKnown RBP eCLIP15.5■□□□□ 0.07
DHFR-201ENST00000439211 TSTD2Q5T7W7 516 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 NXNL2Q5VZ03 156 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 KIAA0930Q6ICG6 404 aaPredicted RBP15.5■□□□□ 0.07
DHFR-201ENST00000439211 ZNF767PQ75MW2 155 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 KBTBD8Q8NFY9 601 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 PSMG2Q969U7 264 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 MYRFLQ96LU7 910 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 GFM1Q96RP9 751 aaKnown RBP15.5■□□□□ 0.07
DHFR-201ENST00000439211 MMP28Q9H239 520 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 AKTIPQ9H8T0 292 aa15.5■□□□□ 0.07
DHFR-201ENST00000439211 RAMP2O60895 175 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 LBPP18428 481 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 ARHGDIAP52565 204 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 FSCN1Q16658 493 aaKnown RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 PNCKQ6P2M8 343 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 IL17RDQ8NFM7 739 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 ANKRD49Q8WVL7 239 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 PCNPQ8WW12 178 aaKnown RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 LIMD1Q9UGP4 676 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 SLC12A8A0AV02 714 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 IRAK2O43187 625 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 SGO1Q5FBB7 561 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 PLET1Q6UQ28 207 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 SLC16A12Q6ZSM3 486 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 LRRC8DQ7L1W4 858 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 ADGRG5Q8IZF4 528 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 TWIST2Q8WVJ9 160 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 HMCESQ96FZ2 354 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 SEPT5Q99719 369 aaPredicted RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 TSEN34Q9BSV6 310 aaKnown RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 ZBTB20Q9HC78 741 aaPredicted RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 LTB4R2Q9NPC1 389 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 MIOSQ9NXC5 875 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 KIF17Q9P2E2 1029 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 SHROOM3Q8TF72 1996 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 BTN3A1O00481 513 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 GABARAPO95166 117 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 RPL35P42766 123 aaKnown RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 GP2P55259 537 aaKnown RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 BTN1A1Q13410 526 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 TAF1CQ15572 869 aaPredicted RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 PDZK1Q5T2W1 519 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 ST8SIA2Q92186 375 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 NT5C3BQ969T7 300 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 UHRF1Q96T88 793 aaPredicted RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 TRIM45Q9H8W5 580 aaPredicted RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 ERVMER34-1Q9H9K5 563 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 FANCFQ9NPI8 374 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 DLGAP1O14490 977 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 BCKDKO14874 412 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 SSX4O60224 188 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 CELF2O95319 508 aaKnown RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 CYP2C18P33260 490 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 MLLT6P55198 1093 aaPredicted RBP15.49■□□□□ 0.07
DHFR-201ENST00000439211 SCAPQ12770 1279 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 CLCA4Q14CN2 919 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 ZRANB3Q5FWF4 1079 aa15.49■□□□□ 0.07
DHFR-201ENST00000439211 RABL3Q5HYI8 236 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms