RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SYNCRIPO60506 623 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 IGKV3-20P01619 116 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 INHBAP08476 426 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 GNAZP19086 355 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 MT3P25713 68 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 HYAL1Q12794 435 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 HSPB3Q12988 150 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 SFMBT2Q5VUG0 894 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 SLC35E4Q6ICL7 350 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 ANO5Q75V66 913 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 MARK2Q7KZI7 788 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF329Q86UD4 541 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 PLD3Q8IV08 490 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 CRYBG2Q8N1P7 616 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 TTC30BQ8N4P2 665 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 NKAIN3Q8N8D7 197 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 PI4KAP1Q8N8J0 262 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 CNBD1Q8NA66 436 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 CAMKVQ8NCB2 501 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 OR2T12Q8NG77 320 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 ATP6V1E2Q96A05 226 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 SGK494Q96LW2 274 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 ANKZF1Q9H8Y5 726 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 GRPEL1Q9HAV7 217 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 EQTNQ9NQ60 294 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 PFDN4Q9NQP4 134 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 DPP3Q9NY33 737 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 COQ3Q9NZJ6 369 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 TUBE1Q9UJT0 475 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 SMCHD1A6NHR9 2005 aa3.41□□□□□ -1.86
TRAPPC13-204ENST00000438419 MEIS2O14770 477 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 CELF2O95319 508 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 PENKP01210 267 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 RPN1P04843 607 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 OR52Z1P0C646 297 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 LINGO3P0C6S8 592 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 OR2T7P0C7T2 308 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 IGHV4-38-2P0DP08 117 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 PTAFRP25105 342 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 SLC6A6P31641 620 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 PCGF2P35227 344 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 TIMP3P35625 211 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 SLC9A3P48764 834 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZNF75DP51815 510 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 MDH1BQ5I0G3 518 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 WDR38Q5JTN6 314 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 HECTD3Q5T447 861 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 RNASEH2BQ5TBB1 312 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZBTB49Q6ZSB9 765 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 STPG4Q8N801 248 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 SPDL1Q96EA4 605 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 SLC47A1Q96FL8 570 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZNF558Q96NG5 402 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 RAB3IPQ96QF0 476 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 ADPGKQ9BRR6 497 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 BTBD10Q9BSF8 475 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 WNT5BQ9H1J7 359 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 BICC1Q9H694 974 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZWILCHQ9H900 591 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 ACKR4Q9NPB9 350 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 PIH1D3Q9NQM4 214 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 ECHDC1Q9NTX5 307 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 PRMT7Q9NVM4 692 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 OSER1Q9NX31 292 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 PTTG2Q9NZH5 202 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 SLC7A7Q9UM01 511 aa3.4□□□□□ -1.87
TRAPPC13-204ENST00000438419 A0A1W2PPM1 405 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 ARHGEF37A1IGU5 675 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 HYKKA2RU49 373 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 SERINC4A6NH21 518 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 OR6C76A6NM76 312 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 CLIC2O15247 247 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 LINC01565O15544 149 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 GRID2O43424 1007 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 KRT86O43790 486 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 OR10H2O60403 315 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 TOMM70O94826 608 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 PLGP00747 810 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 SP1P08047 785 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 ACP2P11117 423 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 SCG2P13521 617 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 LIFP15018 202 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 ACHEP22303 614 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 EPHA2P29317 976 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 HSPA4P34932 840 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 CDKN1AP38936 164 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 NPY4RP50391 375 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 CX3CL1P78423 397 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 TFCP2Q12800 502 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 KRT81Q14533 505 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 HYAL4Q2M3T9 481 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZC2HC1CQ53FD0 456 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 KLHL26Q53HC5 615 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 C1QTNF12Q5T7M4 302 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 PLA2G4FQ68DD2 849 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 CAVIN1Q6NZI2 390 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 SUSD1Q6UWL2 747 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 CEACAM20Q6UY09 585 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 PPP1R21Q6ZMI0 780 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms