RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PTPN7P35236 360 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 ADRA1AP35348 466 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 CD151P48509 253 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 CD97P48960 835 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 CACNG1Q06432 222 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 ABRQ12979 859 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 CBLBQ13191 982 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 PRKG2Q13237 762 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 ATP1A4Q13733 1029 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 BOP1Q14137 746 aaKnown RBP7.52□□□□□ -1.21
VPS50-203ENST00000436177 NADK2Q4G0N4 442 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 C4orf17Q53FE4 359 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 CAPRIN2Q6IMN6 1127 aaKnown RBP7.52□□□□□ -1.21
VPS50-203ENST00000436177 RANBP10Q6VN20 620 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 MED25Q71SY5 747 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 SERPINA9Q86WD7 417 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 TMTC1Q8IUR5 882 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 CCDC116Q8IYX3 515 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 DSELQ8IZU8 1212 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 TXLNBQ8N3L3 684 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 LILRA3Q8N6C8 439 aaPredicted RBP7.52□□□□□ -1.21
VPS50-203ENST00000436177 UBL4BQ8N7F7 174 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 ARMC2Q8NEN0 867 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 OR52E1Q8NGJ3 308 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 OR1L3Q8NH93 324 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 GSDMBQ8TAX9 411 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 CCDC110Q8TBZ0 833 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 TM9SF4Q92544 642 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 TFGQ92734 400 aaPredicted RBP7.52□□□□□ -1.21
VPS50-203ENST00000436177 DNAJC1Q96KC8 554 aaKnown RBP7.52□□□□□ -1.21
VPS50-203ENST00000436177 PPM1MQ96MI6 270 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 FAM118BQ9BPY3 351 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 C19orf43Q9BQ61 176 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 DHRS4Q9BTZ2 278 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 KLHL25Q9H0H3 589 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 LRRC40Q9H9A6 602 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 AKIRIN1Q9H9L7 192 aaPredicted RBP7.52□□□□□ -1.21
VPS50-203ENST00000436177 TXLNGQ9NUQ3 528 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 SMARCAL1Q9NZC9 954 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 NDOR1Q9UHB4 597 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 SRPK3Q9UPE1 567 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 ASF1AQ9Y294 204 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 EFR3BQ9Y2G0 817 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 TDRKHQ9Y2W6 561 aaKnown RBP7.52□□□□□ -1.21
VPS50-203ENST00000436177 AP1M2Q9Y6Q5 423 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 DOPEY1Q5JWR5 2465 aa7.52□□□□□ -1.21
VPS50-203ENST00000436177 CLEC18AA5D8T8 446 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 LIN7AO14910 233 aaPredicted RBP7.51□□□□□ -1.21
VPS50-203ENST00000436177 ZNF749O43361 778 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 AP2A2O94973 939 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 LCA5LO95447 670 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 RPN2P04844 631 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 MSL3P1P0C860 447 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 PVRP15151 417 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 ST6GAL1P15907 406 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 CA5AP35218 305 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 FOLR3P41439 243 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 NSG1P42857 185 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 UQCRFS1P47985 274 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 XIAPP98170 497 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 OLIG2Q13516 323 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 RAPSNQ13702 412 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 LAMB3Q13751 1172 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
VPS50-203ENST00000436177 SPARCL1Q14515 664 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 POU6F1Q14863 301 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 INPP5JQ15735 1006 aaPredicted RBP7.51□□□□□ -1.21
VPS50-203ENST00000436177 CYP2A13Q16696 494 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 PLEKHS1Q5SXH7 462 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 VWA5B1Q5TIE3 1220 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 PRAMEF17Q5VTA0 474 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 IRAK1BP1Q5VVH5 260 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 MLIPQ5VWP3 458 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 LYPLAL1Q5VWZ2 237 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 SPESP1Q6UW49 350 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 FAM198BQ6UWH4 519 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 CLEC18BQ6UXF7 455 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 MRGPREQ86SM8 312 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 KIAA1328Q86T90 577 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 LINC00523Q86TU6 105 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 IQCKQ8N0W5 287 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 CLDN19Q8N6F1 224 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 C19orf47Q8N9M1 422 aaKnown RBP7.51□□□□□ -1.21
VPS50-203ENST00000436177 DNAAF3Q8N9W5 541 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 FAM71DQ8N9W8 422 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 CLEC18CQ8NCF0 446 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 PHC3Q8NDX5 983 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 SSC4DQ8WTU2 575 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 ELMO1Q92556 727 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 TCTN2Q96GX1 697 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 FER1L6-AS2Q96M78 137 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 NDC1Q9BTX1 674 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 TSSK1BQ9BXA7 367 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 PITPNM3Q9BZ71 974 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 OR52A5Q9H2C5 316 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 TFB2MQ9H5Q4 396 aaKnown RBP7.51□□□□□ -1.21
VPS50-203ENST00000436177 XKR8Q9H6D3 395 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 CASS4Q9NQ75 786 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 PCMTD2Q9NV79 361 aa7.51□□□□□ -1.21
VPS50-203ENST00000436177 ACTR10Q9NZ32 417 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms