RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 LHPPQ9H008 270 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 BTBD1Q9H0C5 482 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 PIF1Q9H611 641 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 ASB7Q9H672 318 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 MVB12BQ9H7P6 319 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 SPON1Q9HCB6 807 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 CISHQ9NSE2 258 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 SRRDQ9UH36 339 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 RUVBL2Q9Y230 463 aaKnown RBP7.21□□□□□ -1.26
GARNL3-205ENST00000435213 KCNK7Q9Y2U2 307 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 ANK1P16157 1881 aa7.21□□□□□ -1.26
GARNL3-205ENST00000435213 BRCA1P38398 1863 aaKnown RBP7.21□□□□□ -1.26
GARNL3-205ENST00000435213 COL11A2P13942 1736 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 DCXO43602 365 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 H2AFYO75367 372 aaKnown RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 BCAS2O75934 225 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 KLHL18O94889 574 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 RRASP10301 218 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 SLC2A4P14672 509 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 HNRNPLP14866 589 aaKnown RBP eCLIP7.2□□□□□ -1.262e-12■■■■□ 21.9
GARNL3-205ENST00000435213 HNF4AP41235 474 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 PTGER2P43116 358 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 SLC7A2P52569 658 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 NRLP54845 237 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 SOX10P56693 466 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 EMC2Q15006 297 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 CA9Q16790 459 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 PIGGQ5H8A4 983 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 CLLU1Q5K131 121 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 STRIP1Q5VSL9 837 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ZNF227Q86WZ6 799 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 OR6M1Q8NGM8 313 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 MCFD2Q8NI22 146 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ELMO1Q92556 727 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 MMP19Q99542 508 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 MSTO1Q9BUK6 570 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ASPSCR1Q9BZE9 553 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 NUAK2Q9H093 628 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 MMP27Q9H306 513 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ESRP2Q9H6T0 727 aaKnown RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 GLRX2Q9NS18 164 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 RDH8Q9NYR8 311 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 OR6C2Q9NZP2 312 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 IFT80Q9P2H3 777 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 NDRG3Q9UGV2 375 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 CPA4Q9UI42 421 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 RUVBL1Q9Y265 456 aaKnown RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 PCDHGB1Q9Y5G3 927 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ADGRA2Q96PE1 1338 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 MEIOCA2RUB1 952 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 NFIBO00712 420 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 TRIM24O15164 1050 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 SLC31A2O15432 143 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 TRIM3O75382 744 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 USP2O75604 605 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 IFNA7P01567 189 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 MBP02144 154 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 FBP1P09467 338 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ZNF16P17020 682 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ARF4P18085 180 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 G0S2P27469 103 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 RPL10P27635 214 aaKnown RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ALDH9A1P49189 494 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 GPR50Q13585 617 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 MANEALQ5VSG8 457 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 DENND1BQ6P3S1 775 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 TRMT10BQ6PF06 316 aaKnown RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 SEZ6L2Q6UXD5 910 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 XYLT1Q86Y38 959 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 CDKL3Q8IVW4 592 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 EFCAB3Q8N7B9 438 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 SETD6Q8TBK2 473 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 POC1BQ8TC44 478 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 TFAP2BQ92481 460 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 USP13Q92995 863 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 MASTLQ96GX5 879 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 RNF157Q96PX1 679 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 TCEAL7Q9BRU2 100 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 PTDSS2Q9BVG9 487 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 HAPLN2Q9GZV7 340 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ILKAPQ9H0C8 392 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 C2orf40Q9H1Z8 148 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 PDZD7Q9H5P4 517 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 GAREM1Q9H706 876 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 PRMT8Q9NR22 394 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 CUEDC1Q9NWM3 386 aaPredicted RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 DUS2Q9NX74 493 aaKnown RBP7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ZNF69Q9UC07 566 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 CRYL1Q9Y2S2 319 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 LOC100653049A0A140TA62 436 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 A0A1B0GV90 55 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 EFCAB7A8K855 629 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 TPP1O14773 563 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 KRT34O76011 436 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 APRTP07741 180 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ZDHHC11BP0C7U3 371 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 ADORA3P0DMS8 318 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 PREPP48147 710 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 NUDT2P50583 147 aa7.2□□□□□ -1.26
GARNL3-205ENST00000435213 CASP6P55212 293 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms