RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TSPAN3O60637 253 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 PDGFAP04085 211 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 M6PRP20645 277 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ACVR2AP27037 513 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 IDH2P48735 452 aaKnown RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 OR5K1Q8NHB7 308 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SH3KBP1Q96B97 665 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 RIPOR3Q96MK2 946 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 MBD2Q9UBB5 411 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 MKLN1Q9UL63 735 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF451Q9Y4E5 1061 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 H3BM21 787 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 PLD2O14939 933 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 KIAA0513O60268 411 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ERN1O75460 977 aaKnown RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 HPRP00739 348 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 CLEC2LP0C7M8 214 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 BMP1P13497 986 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 HERVK_113P63132 956 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 NKX3-2P78367 333 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 DBPQ10586 325 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 VANGL1Q8TAA9 524 aaPredicted RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 GPR151Q8TDV0 419 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 TRMT61AQ96FX7 289 aaKnown RBP7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF583Q96ND8 569 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 ERVK-6Q9BXR3 956 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 PIGVQ9NUD9 493 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 GLTPQ9NZD2 209 aa7.32□□□□□ -1.24
CPSF6-202ENST00000435070 SBF2Q86WG5 1849 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 EFCAB10A6NFE3 127 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PEX14O75381 377 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SERPINA1P01009 418 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 RPLP0P05388 317 aaKnown RBP7.31□□□□□ -1.24
CPSF6-202ENST00000435070 FOSL1P15407 271 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 ITGA2P17301 1181 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CTRB1P17538 263 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 AGTR2P50052 363 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PRKCDQ05655 676 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CTRB2Q6GPI1 263 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CCDC149Q6ZUS6 474 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 HFE2Q6ZVN8 426 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 C16orf62Q7Z3J2 963 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SLC44A2Q8IWA5 706 aaPredicted RBP7.31□□□□□ -1.24
CPSF6-202ENST00000435070 KBTBD8Q8NFY9 601 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PJA1Q8NG27 643 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 GPRASP2Q96D09 838 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 BCL7BQ9BQE9 202 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 AIFM2Q9BRQ8 373 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TTPALQ9BTX7 342 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TMEM106CQ9BVX2 250 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 C1QTNF7Q9BXJ2 289 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SLC52A3Q9NQ40 469 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SMPD4Q9NXE4 827 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 MLYCDO95822 493 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 STSP08842 583 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SOX6P35712 828 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CSRP3P50461 194 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 EFNA5P52803 228 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TAGLNQ01995 201 aaKnown RBP7.31□□□□□ -1.24
CPSF6-202ENST00000435070 FOXM1Q08050 763 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SMARCB1Q12824 385 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 IL18R1Q13478 541 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PTPRCAPQ14761 206 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TMEM132DQ14C87 1099 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CRY2Q49AN0 593 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 DPF3Q92784 378 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TBL1YQ9BQ87 522 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TRMOQ9BU70 441 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CXCL16Q9H2A7 254 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TM9SF3Q9HD45 589 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PDP1Q9P0J1 537 aaPredicted RBP7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SLC23A1Q9UHI7 598 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PCDHGB1Q9Y5G3 927 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CXCR6O00574 342 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 MATN4O95460 622 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 NAGAP17050 411 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 GGT1P19440 569 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SOX9P48436 509 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 STAT5BP51692 787 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 AKR1D1P51857 326 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PUDPQ08623 228 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 INCA1Q0VD86 236 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 MED22Q15528 200 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CCDC157Q569K6 752 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 UBE2Q1Q7Z7E8 422 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 SP8Q8IXZ3 490 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 PGBD3Q8N328 593 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 KIAA1958Q8N8K9 716 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 GALNT11Q8NCW6 608 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 ZMIZ2Q8NF64 920 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TRPM4Q8TD43 1214 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TMCO6Q96DC7 493 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 TEKT5Q96M29 485 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 RDH12Q96NR8 316 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 APOL4Q9BPW4 351 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 GON7Q9BXV9 100 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CYP3A43Q9HB55 503 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 ABCB9Q9NP78 766 aa7.31□□□□□ -1.24
CPSF6-202ENST00000435070 CNTNAP1P78357 1384 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms