RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 PRAMEF11O60813 436 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 NDUFS7O75251 213 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 RFPL2O75678 378 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 STAM2O75886 525 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 BCAS2O75934 225 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 AKAP3O75969 853 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 PPP1R3DO95685 299 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 UROSP10746 265 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 GAP43P17677 238 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 PSMB4P28070 264 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 CDC25CP30307 473 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 HPDP32754 393 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 CASP3P42574 277 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 PDLIM4P50479 330 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 NAGLUP54802 743 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 CLDN20P56880 219 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 CSNK2A1P68400 391 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 RPL36AP83881 106 aaKnown RBP2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 CBX3Q13185 183 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 MORF4L2Q15014 288 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 OASLQ15646 514 aaKnown RBP2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 SYT16Q17RD7 645 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 C2orf76Q3KRA6 126 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 SETMARQ53H47 684 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 SHEQ5VZ18 495 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 GALNT17Q6IS24 598 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 PODNL1Q6PEZ8 512 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 RHBDF2Q6PJF5 856 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 FAM198BQ6UWH4 519 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 PRSS57Q6UWY2 283 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 ISLR2Q6UXK2 745 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 SLC36A4Q6YBV0 504 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 ARMC9Q7Z3E5 817 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 RABEPKQ7Z6M1 372 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 PEX5LQ8IYB4 626 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 PGBD5Q8N414 524 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 SLC38A9Q8NBW4 561 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 CSNK2A3Q8NEV1 391 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 BBS10Q8TAM1 723 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 UTP15Q8TED0 518 aaKnown RBP2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 WFIKKN2Q8TEU8 576 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 TEKT1Q969V4 418 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 MOAP1Q96BY2 351 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 CCDC43Q96MW1 224 aaKnown RBP2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 SPATA13Q96N96 652 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 TSPAN18Q96SJ8 248 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 KXD1Q9BQD3 176 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 INPP5KQ9BT40 448 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 C1QTNF4Q9BXJ3 329 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 ABCG4Q9H172 646 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 TMEM206Q9H813 350 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 DDX31Q9H8H2 851 aaKnown RBP2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 Q9N2K0 584 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 TUFT1Q9NNX1 390 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 SMARCAL1Q9NZC9 954 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 IL17BQ9UHF5 180 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 SNX9Q9Y5X1 595 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 TEX264Q9Y6I9 313 aa2.84□□□□□ -1.95
HMGB1P9-201ENST00000429856 EVPLQ92817 2033 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 A0A1B0GUV1 79 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 PRSS51A0A1B0GVH4 220 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 A0A1W2PP11 408 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 A0A1W2PPK0 400 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 A0A1W2PPQ1 181 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 MAGEA13PA6NCF6 341 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 KRT87PA6NCN2 255 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SRRM3A6NNA2 597 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 H0YIG0 161 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SLC33A1O00400 549 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 CAPN9O14815 690 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 EIF3DO15371 548 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 NDUFS4O43181 175 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 AP5Z1O43299 807 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 RTN2O75298 545 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SLC16A8O95907 504 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 RLN1P04808 185 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 RAB40ALP0C0E4 278 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 UGT1A1P22309 533 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 BDKRB2P30411 391 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SSTR2P30874 369 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 CDKN1AP38936 164 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 WNT5AP41221 380 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 RABIFP47224 123 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZNF131P52739 623 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 LIMK1P53667 647 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 BRWD1-AS2P59051 145 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 STARD6P59095 220 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 TAS2R38P59533 333 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 CD81P60033 236 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SEC61BP60468 96 aaKnown RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 POLR2FP61218 127 aaKnown RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SNRPEP62304 92 aaKnown RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 CDK3Q00526 305 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 PNRC1Q12796 327 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 DLG1Q12959 904 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 HSPB3Q12988 150 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 GRIK2Q13002 908 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 MAD2L1Q13257 205 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SF3B4Q15427 424 aaKnown RBP eCLIP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms