RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 TPGS1Q6ZTW0 290 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 HDAC2Q92769 488 aaKnown RBP13.48□□□□□ -0.25
SGMS1-203ENST00000429490 COPS4Q9BT78 406 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 KAT8Q9H7Z6 458 aaKnown RBP13.48□□□□□ -0.25
SGMS1-203ENST00000429490 RAPGEFL1Q9UHV5 662 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 ASB1Q9Y576 335 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 MUSKO15146 869 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 GKP32189 559 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 ILF2Q12905 390 aaKnown RBP13.48□□□□□ -0.25
SGMS1-203ENST00000429490 SERINC3Q13530 473 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 RFX4Q33E94 735 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 CYP27C1Q4G0S4 372 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 ELMSAN1Q6PJG2 1045 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 ZFAND4Q86XD8 727 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 RHEBL1Q8TAI7 183 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 BRI3BPQ8WY22 251 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 SH3YL1Q96HL8 342 aaPredicted RBP13.48□□□□□ -0.25
SGMS1-203ENST00000429490 MTERF1Q99551 399 aaKnown RBP13.48□□□□□ -0.25
SGMS1-203ENST00000429490 KCNS3Q9BQ31 491 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 GIMAP4Q9NUV9 329 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 C1orf109Q9NX04 203 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 BTBD3Q9Y2F9 522 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 NUMA1Q14980 2115 aa13.48□□□□□ -0.25
SGMS1-203ENST00000429490 SCELO95171 688 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 PIM1P11309 404 aaPredicted RBP13.47□□□□□ -0.25
SGMS1-203ENST00000429490 SOX6P35712 828 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 KIR3DL1P43629 444 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 RPS14P62263 151 aaKnown RBP13.47□□□□□ -0.25
SGMS1-203ENST00000429490 MAP2K5Q13163 448 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 VARS2Q5ST30 1063 aaKnown RBP13.47□□□□□ -0.25
SGMS1-203ENST00000429490 VTCN1Q7Z7D3 282 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 ZNF280BQ86YH2 543 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 TRIM39Q9HCM9 518 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 CEP350Q5VT06 3117 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 IQCA1LA6NCM1 817 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 LCKP06239 509 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 GSTT2P0CG29 244 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 GSTT2BP0CG30 244 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 HRH2P25021 359 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 IDUAP35475 653 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 RPS3AP61247 264 aaKnown RBP13.47□□□□□ -0.25
SGMS1-203ENST00000429490 TP53BP2Q13625 1128 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 POM121L1PQ3SYA9 428 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 DEPDC1Q5TB30 811 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 UMODL1-AS1Q8N2C9 162 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 STK40Q8N2I9 435 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.47□□□□□ -0.25
SGMS1-203ENST00000429490 OSER1Q9NX31 292 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 WDR37Q9Y2I8 494 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 H3BN98 237 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 SLC28A1O00337 649 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 PRRG1O14668 218 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 CAPN15O75808 1086 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 ALOX5P09917 674 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 AKR1A1P14550 325 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 RPIAP49247 311 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 PON2Q15165 354 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
SGMS1-203ENST00000429490 SPRED1Q7Z699 444 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 TTC30BQ8N4P2 665 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 CHDHQ8NE62 594 aaPredicted RBP13.47□□□□□ -0.25
SGMS1-203ENST00000429490 OR13F1Q8NGS4 319 aa13.47□□□□□ -0.25
SGMS1-203ENST00000429490 DPH2Q9BQC3 489 aaPredicted RBP13.47□□□□□ -0.25
SGMS1-203ENST00000429490 ARIH1Q9Y4X5 557 aaPredicted RBP13.47□□□□□ -0.25
SGMS1-203ENST00000429490 IDH3BO43837 385 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 ALPLP05186 524 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 TYMPP19971 482 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 RGRP47804 291 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 BCL2L1Q07817 233 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 RGL4Q8IZJ4 473 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 PGBD5Q8N414 524 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 SVOPLQ8N434 492 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 OR9Q1Q8NGQ5 310 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 AASDHPPTQ9NRN7 309 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 CPQQ9Y646 472 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 ZFC3H1O60293 1989 aaKnown RBP13.46□□□□□ -0.25
SGMS1-203ENST00000429490 EFCAB10A6NFE3 127 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 ANKRD66B4E2M5 251 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 FPGTO14772 594 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 UGT2B11O75310 529 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 DCTP40126 519 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 ZNF157P51786 506 aaPredicted RBP13.46□□□□□ -0.25
SGMS1-203ENST00000429490 MXD1Q05195 221 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 PLD1Q13393 1074 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 TAF1AQ15573 450 aaPredicted RBP13.46□□□□□ -0.25
SGMS1-203ENST00000429490 SYTL3Q4VX76 610 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 RAB41Q5JT25 222 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 DSG4Q86SJ6 1040 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 NETO1Q8TDF5 533 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 GTPBP3Q969Y2 492 aaKnown RBP13.46□□□□□ -0.25
SGMS1-203ENST00000429490 LGALS12Q96DT0 336 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 TNKS2Q9H2K2 1166 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 NUDT4Q9NZJ9 180 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 KCNH4Q9UQ05 1017 aa13.46□□□□□ -0.25
SGMS1-203ENST00000429490 LOC110117498-PIK3R3F6TDL0 507 aa13.46□□□□□ -0.26
SGMS1-203ENST00000429490 SLC22A1O15245 554 aa13.46□□□□□ -0.26
SGMS1-203ENST00000429490 ACOX3O15254 700 aa13.46□□□□□ -0.26
SGMS1-203ENST00000429490 TBL1XO60907 577 aa13.46□□□□□ -0.26
SGMS1-203ENST00000429490 MTX2O75431 263 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms