RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SAMD14Q8IZD0 417 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 CNTN6Q9UQ52 1028 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 TAF1P21675 1872 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 DUX1O43812 170 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 IRF9Q00978 393 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 SLC13A3Q8WWT9 602 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 DGAT2Q96PD7 388 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 DEPDC7Q96QD5 511 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 KCNS3Q9BQ31 491 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 TFB2MQ9H5Q4 396 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 KLHL1Q9NR64 748 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 ARHGEF3Q9NR81 526 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 TRIM43BA6NCK2 446 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 LILRB3O75022 631 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 TDGQ13569 410 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 SCD5Q86SK9 330 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 TRIM43Q96BQ3 446 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 ZNF354BQ96LW1 612 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 VPS35Q96QK1 796 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 RPRD1BQ9NQG5 326 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 PFDN1O60925 122 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 OR6B1O95007 311 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 ADRB3P13945 408 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 IRS1P35568 1242 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 LYSMD4Q5XG99 296 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 GK5Q6ZS86 529 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 NAT8LQ8N9F0 302 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 ATOH1Q92858 354 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 CENPTQ96BT3 561 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 APOL4Q9BPW4 351 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 FAM155AB1AL88 458 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 ADGRG6Q86SQ4 1221 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 ZC3H3Q8IXZ2 948 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 RP9Q8TA86 221 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 NPAS2Q99743 824 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 TMEM79Q9BSE2 394 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 C1orf109Q9NX04 203 aa16.74■□□□□ 0.27
SMARCA4-203ENST00000429416 PCDH7O60245 1069 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 SIX3O95343 332 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 NFKB2Q00653 900 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 NR1D2Q14995 579 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 FAM26DQ5JW98 314 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 MBOAT1Q6ZNC8 495 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 CPSF7Q8N684 471 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 GATA5Q9BWX5 397 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 RUVBL1Q9Y265 456 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 PLIN3O60664 434 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 NCBP2P52298 156 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 RGS8P57771 180 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 SGCBQ16585 318 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 ZNF605Q86T29 641 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 THOC6Q86W42 341 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 IPCEF1Q8WWN9 437 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 TAPBPLQ9BX59 468 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 FBRSQ9HAH7 460 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 ZNF334Q9HCZ1 680 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 OR6C74A6NCV1 312 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 PIP5K1BO14986 540 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 PDPK1O15530 556 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 ECI2O75521 394 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 TPP2P29144 1249 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 GDF5P43026 501 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 COL9A2Q14055 689 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 TOR1AIP1Q5JTV8 583 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 DCAF12L1Q5VU92 463 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 TANGO2Q6ICL3 276 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 SPESP1Q6UW49 350 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 HCAR2Q8TDS4 363 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 RGMAQ96B86 450 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 TOE1Q96GM8 510 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 USP29Q9HBJ7 922 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 MAGEE1Q9HCI5 957 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 SORCS3Q9UPU3 1222 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 SH3GLB1Q9Y371 365 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 PFKLP17858 780 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 HOXC12P31275 282 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 SLC7A2P52569 658 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 PTSQ03393 145 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 AGTRAPQ6RW13 159 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 OR2T12Q8NG77 320 aa16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 WDR36Q8NI36 951 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-203ENST00000429416 TMEM265A0A087WTH1 108 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 EPOP01588 193 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 SAGP10523 405 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 KLC1Q07866 573 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 FGD2Q7Z6J4 655 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 KIAA2013Q8IYS2 634 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 SRCP12931 536 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 SHMT2P34897 504 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 RBM20Q5T481 1227 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 VWA5B1Q5TIE3 1220 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 ANKRD54Q6NXT1 300 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 HSPA12BQ96MM6 686 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 KLHL4Q9C0H6 718 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 DCLRE1BQ9H816 532 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 ZNF358Q9NW07 568 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 TRPS1Q9UHF7 1281 aa16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-203ENST00000429416 PRR5-ARHGAP8B1AHC4 643 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms