RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 Q3ZCU0 254 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 ARFGAP1Q8N6T3 406 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 ZNF431Q8TF32 576 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 LGMNQ99538 433 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 CCNB1IP1Q9NPC3 277 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 ACOXLQ9NUZ1 547 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 INTS7Q9NVH2 962 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 CUEDC1Q9NWM3 386 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 SMCHD1A6NHR9 2005 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 LEUTXA8MZ59 168 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 HOXB8P17481 243 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 CYP2C18P33260 490 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 GLRBP48167 497 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 FRG1Q14331 258 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 PCLAFQ15004 111 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 ATP6AP1Q15904 470 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 TBC1D19Q8N5T2 526 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 HASPINQ8TF76 798 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 LPPQ93052 612 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 ARL5BQ96KC2 179 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 PRDM8Q9NQV8 689 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 COPZ2Q9P299 210 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 CYTH4Q9UIA0 394 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 ACSL5Q9ULC5 683 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 PTCH2Q9Y6C5 1203 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 KPNA5O15131 536 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 SGCEO43556 437 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 CSF2P04141 144 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 TUBB3Q13509 450 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 NFYCQ13952 458 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 DAG1Q14118 895 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 PSMD5Q16401 504 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 SLC10A6Q3KNW5 377 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 CES3Q6UWW8 571 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 ZNF784Q8NCA9 323 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 SLC9A7Q96T83 725 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 MRPL57Q9BQC6 102 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 ACSS2Q9NR19 701 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 TMEM181Q9P2C4 612 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 ADGRE2Q9UHX3 823 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 COPG1Q9Y678 874 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 SMIM28A0A1B0GU29 152 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 SELPP16109 830 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 GABRB3P28472 473 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 SH3PXD2AQ5TCZ1 1133 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 BRAT1Q6PJG6 821 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 SPESP1Q6UW49 350 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 EIF3MQ7L2H7 374 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 PARP16Q8N5Y8 322 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 KCNS3Q9BQ31 491 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 SLC30A2Q9BRI3 323 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 MND1Q9BWT6 205 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 GATA5Q9BWX5 397 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 CHMP1AQ9HD42 196 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 DDIT4Q9NX09 232 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 GJD2Q9UKL4 321 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 PCDHB3Q9Y5E6 796 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 LYVE1Q9Y5Y7 322 aa14.17□□□□□ -0.14
SYNGAP1-203ENST00000428982 DICER1Q9UPY3 1922 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 FAM240BA0A1B0GVZ2 78 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 OR5K3A6NET4 321 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 WWP2O00308 870 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 JCHAINP01591 159 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 ELAVL2Q12926 359 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 DMC1Q14565 340 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 CLCA4Q14CN2 919 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 CATSPEREQ5SY80 951 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 SLC5A11Q8WWX8 675 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 SENP8Q96LD8 212 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 ZNF578Q96N58 590 aaPredicted RBP14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 WDCPQ9H6R7 721 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 CPNE7Q9UBL6 633 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 NRLP54845 237 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 ADIGQ0VDE8 80 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 CNSTQ6PJW8 725 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 TMPRSS11AQ6ZMR5 421 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 CMC1Q7Z7K0 106 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 TMEM86AQ8N2M4 240 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 YIPF7Q8N8F6 280 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 C12orf29Q8N999 325 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 CSF3RQ99062 836 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 GLS2Q9UI32 602 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 G3V2T6 193 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 NPHS1O60500 1241 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 ERN1O75460 977 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 FCER2P06734 321 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 CBLBQ13191 982 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 PPM1JQ5JR12 505 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 LRRC8DQ7L1W4 858 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 CHMP1BQ7LBR1 199 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 SLC2A14Q8TDB8 520 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 SLC7A6Q92536 515 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 TMEM169Q96HH4 297 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 COPS4Q9BT78 406 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 NDUFAF1Q9Y375 327 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 PRELID3BQ9Y3B1 194 aa14.16□□□□□ -0.14
SYNGAP1-203ENST00000428982 TCRBV3S1A0A5B6 114 aa14.15□□□□□ -0.14
SYNGAP1-203ENST00000428982 PRORSD1PA6NEY8 169 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms