RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PIH1D1Q9NWS0 290 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 MRPL39Q9NYK5 338 aaKnown RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 KLHL8Q9P2G9 620 aaPredicted RBP5.05□□□□□ -1.6
RIF1-203ENST00000428287 STOML2Q9UJZ1 356 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 RIMKLBQ9ULI2 386 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 SPEF1Q9Y4P9 236 aa5.05□□□□□ -1.6
RIF1-203ENST00000428287 IQCMA0A1B0GVH7 501 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 SLC22A3O75751 556 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 LCKP06239 509 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 GGT1P19440 569 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 MLLT6P55198 1093 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 RACK1P63244 317 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 HYAL2Q12891 473 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 OLIG2Q13516 323 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 FAM182AQ5T1J6 154 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 MANEALQ5VSG8 457 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 RSBN1Q5VWQ0 802 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 TIGD7Q6NT04 549 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 GABPB2Q8TAK5 448 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 RADILQ96JH8 1075 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 IKZF5Q9H5V7 419 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 CHST12Q9NRB3 414 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PLSCR3Q9NRY6 295 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PIGVQ9NUD9 493 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 DNMT3LQ9UJW3 386 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 NPIPB8E9PQR5 432 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 AP3D1O14617 1153 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 BCKDKO14874 412 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 AIREO43918 545 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TSPAN1O60635 241 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 LTA4HP09960 611 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 MSL3P1P0C860 447 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ABCG1P45844 678 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PGGT1BP53609 377 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ATXN1P54253 815 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 ELP6Q0PNE2 266 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 BAMBIQ13145 260 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 CAPRIN1Q14444 709 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 ANGPT1Q15389 498 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 CLEC6AQ6EIG7 209 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 IFNEQ86WN2 208 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 RBFAQ8N0V3 343 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 GDPD1Q8N9F7 314 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TP53I13Q8NBR0 393 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 ITFG1Q8TB96 612 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 NSUN6Q8TEA1 469 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 TSPAN17Q96FV3 270 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 CEP19Q96LK0 163 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TNKS2Q9H2K2 1166 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ADNPQ9H2P0 1102 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 COMMD8Q9NX08 183 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 CDH9Q9ULB4 789 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 RABL2BQ9UNT1 228 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 AAR2Q9Y312 384 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 IFRD1O00458 451 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 STX16O14662 325 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TSPAN12O95859 305 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 IQCF3P0C7M6 154 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 RRASP10301 218 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 MTHFD1P11586 935 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 GNPDA1P46926 289 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 POU6F2P78424 691 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 KCNC3Q14003 757 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 BCL7AQ4VC05 210 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 RBM20Q5T481 1227 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 PM20D1Q6GTS8 502 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 MSRB3Q8IXL7 192 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ZNF680Q8NEM1 530 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 MCOLN3Q8TDD5 553 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 MAGEB10Q96LZ2 347 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 TMEM74Q96NL1 305 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 KCTD15Q96SI1 283 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 PCYT2Q99447 389 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 NOL6Q9H6R4 1146 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 RPAP3Q9H6T3 665 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 POPDC3Q9HBV1 291 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PRDM8Q9NQV8 689 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TAS2R7Q9NYW3 318 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TMA7Q9Y2S6 64 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 TNPO3Q9Y5L0 923 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 GRK5P34947 590 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 CA5AP35218 305 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 GZMMP51124 257 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 KIAA1614Q5VZ46 1190 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 KBTBD8Q8NFY9 601 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 OR4M1Q8NGD0 313 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 BRSK1Q8TDC3 778 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PPP1R13LQ8WUF5 828 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 JPH3Q8WXH2 748 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 GLMNQ92990 594 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PPM1MQ96MI6 270 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TSNARE1Q96NA8 513 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TAAR1Q96RJ0 339 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 DYRK4Q9NR20 520 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ABI2Q9NYB9 513 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 SEC14L4Q9UDX3 406 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PSORS1C1Q9UIG5 152 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 NEU3Q9UQ49 428 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.04□□□□□ -1.61e-6■■■■■ 44.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms