RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 NDST3O95803 873 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 SLC2A2P11168 524 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-204ENST00000428026 TPRG1LQ5T0D9 272 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 TSTD2Q5T7W7 516 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 ATCAYQ86WG3 371 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 CIR1Q86X95 450 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-204ENST00000428026 PHC2Q8IXK0 858 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 FATE1Q969F0 183 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 TMBIM1Q969X1 311 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 RELTQ969Z4 430 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 PDZD7Q9H5P4 517 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 MIOSQ9NXC5 875 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 GABRQQ9UN88 632 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 PCDHGC4Q9Y5F7 938 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 OR2AG2A6NM03 316 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 PSMD9O00233 223 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 RYKP34925 604 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 NUDT6P53370 316 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 ZNF234Q14588 700 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 IFI44LQ53G44 452 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 PDSS2Q86YH6 399 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 TEPSINQ96N21 525 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 APOBEC3GQ9HC16 384 aaKnown RBP14.24□□□□□ -0.13
PTPRU-204ENST00000428026 URADA6NGE7 173 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 ZSCAN5BA6NJL1 495 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 B4GALT4O60513 344 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 CD247P20963 164 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 CBX2Q14781 532 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-204ENST00000428026 ZNF572Q7Z3I7 529 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-204ENST00000428026 TMEM110Q86TL2 294 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 PHTF2Q8N3S3 785 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 C1orf127Q8N9H9 656 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 BARD1Q99728 777 aaKnown RBP14.24□□□□□ -0.13
PTPRU-204ENST00000428026 MAF1Q9H063 256 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 KCNN2Q9H2S1 579 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 SLC9A3R1O14745 358 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-204ENST00000428026 C22orf31O95567 290 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 CYP11A1P05108 521 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 ARL2P36404 184 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 ENTPD1P49961 510 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 DGKEP52429 567 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 TARDBPQ13148 414 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPRU-204ENST00000428026 FAM92BQ6ZTR7 304 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 MON1AQ86VX9 555 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 MINDY2Q8NBR6 621 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 OR10H5Q8NGA6 315 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 FBXL20Q96IG2 436 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 CD320Q9NPF0 282 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 ST14Q9Y5Y6 855 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 PHRF1Q9P1Y6 1649 aaKnown RBP14.23□□□□□ -0.13
PTPRU-204ENST00000428026 ENPP3O14638 875 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 IL7RP16871 459 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 STXBP1P61764 594 aaKnown RBP14.23□□□□□ -0.13
PTPRU-204ENST00000428026 RPL6Q02878 288 aaKnown RBP14.23□□□□□ -0.13
PTPRU-204ENST00000428026 PTGES3Q15185 160 aaKnown RBP14.23□□□□□ -0.13
PTPRU-204ENST00000428026 RFTN2Q52LD8 501 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-204ENST00000428026 SLC30A6Q6NXT4 461 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 IL4I1Q96RQ9 567 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 TRPS1Q9UHF7 1281 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 PHF24Q9UPV7 400 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 MYOCOSA0A1B0GUC4 107 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 IQCCQ4KMZ1 466 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 RBM48Q5RL73 367 aaKnown RBP14.23□□□□□ -0.13
PTPRU-204ENST00000428026 CENPSQ8N2Z9 138 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 FCGR1BQ92637 280 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 PTPN18Q99952 460 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 TMEM27Q9HBJ8 222 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 ZNF304Q9HCX3 659 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 GMIPQ9P107 970 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 H3BM21 787 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 ARVCFO00192 962 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 CLIC3O95833 236 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 CCNCP24863 283 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 CBX5P45973 191 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 SPERTQ8NA61 448 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 OR6C75A6NL08 312 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 ACADLP28330 430 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 CLCNKBP51801 687 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 RPS14P62263 151 aaKnown RBP14.23□□□□□ -0.13
PTPRU-204ENST00000428026 CACNG1Q06432 222 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 ARHGAP1Q07960 439 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 TAF10Q12962 218 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 NPAS4Q8IUM7 802 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 PIGXQ8TBF5 258 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 LRRC3Q9BY71 257 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 RIMKLBQ9ULI2 386 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 FKBP7Q9Y680 259 aa14.23□□□□□ -0.13
PTPRU-204ENST00000428026 TOPAZ1Q8N9V7 1692 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 C2CD4BA6NLJ0 364 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 CCL16O15467 120 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 SIX3O95343 332 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 PRH1P02810 166 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 YES1P07947 543 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 CHRNA4P43681 627 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 ADNP2Q6IQ32 1131 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 ZNF517Q6ZMY9 492 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 RFKQ969G6 155 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 HMCESQ96FZ2 354 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 AIF1LQ9BQI0 150 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms