RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 USP45Q70EL2 814 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SV2AQ7L0J3 742 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 USP17L1Q7RTZ2 530 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 PTAR1Q7Z6K3 402 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CPNE8Q86YQ8 564 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 HID1Q8IV36 788 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ADGRF4Q8IZF3 695 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RNF113BQ8IZP6 322 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM9CQ8IZT9 166 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM181AQ8N9Y4 354 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 MARCH10Q8NA82 808 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF784Q8NCA9 323 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZMIZ2Q8NF64 920 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR8J3Q8NGG0 315 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SPPL2BQ8TCT7 592 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 MAPK15Q8TD08 544 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 GANCQ8TET4 914 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SETD7Q8WTS6 366 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 POMGNT1Q8WZA1 660 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 LPAR1Q92633 364 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 C1orf74Q96LT6 269 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CCDC17Q96LX7 622 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RBM14Q96PK6 669 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RNF157Q96PX1 679 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 TRNT1Q96Q11 434 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 FIZ1Q96SL8 496 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 MMP19Q99542 508 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CGRRF1Q99675 332 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPR22Q99680 433 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SPOCK3Q9BQ16 436 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 IER2Q9BTL4 223 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 GSX2Q9BZM3 304 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 PDGFDQ9GZP0 370 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RHOJQ9H4E5 214 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ELOVL6Q9H5J4 265 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 GORASP2Q9H8Y8 452 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 PRDM11Q9NQV5 511 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SMYD2Q9NRG4 433 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SDHAF3Q9NRP4 125 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 PLCXD1Q9NUJ7 323 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RBFOX1Q9NWB1 397 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 KCTD5Q9NXV2 234 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 MTMR4Q9NYA4 1195 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RBAKQ9NYW8 714 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 EXTL2Q9UBQ6 330 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLCO3A1Q9UIG8 710 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 USP18Q9UMW8 372 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RUVBL2Q9Y230 463 aaKnown RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CBY1Q9Y3M2 126 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 CMAHPQ9Y471 501 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 PCDHGB7Q9Y5F8 929 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 GMPPBQ9Y5P6 360 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RGPD3A6NKT7 1758 aaPredicted RBP5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 RGPD4Q7Z3J3 1758 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 TANC1Q9C0D5 1861 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 ARFGEF1Q9Y6D6 1849 aa5.51□□□□□ -1.53
VTI1BP4-201ENST00000427516 SNED1Q8TER0 1413 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 A0A0A0MRY4 1105 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 A0A0X1KG70 313 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM240BA0A1B0GVZ2 78 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 USP17L5A8MUK1 530 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 MPTX1A8MV57 137 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 A8MX80 341 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 F8VP50 259 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 H3BQ06 376 aaPredicted RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 H3BUI4 141 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 OGTO15294 1046 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 MSH4O15457 936 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 RAD1O60671 282 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PLA2G6O60733 806 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ENTPD3O75355 529 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 RAD17O75943 681 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 LRIG2O94898 1065 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ENDOD1O94919 500 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CLIC3O95833 236 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 FADS2O95864 444 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TRUB2O95900 331 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 NDUFB10O96000 172 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CFBP00751 764 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 IL6P05231 212 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 RB1P06400 928 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PGRP06401 933 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 HTR1AP08908 422 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SPNP16150 400 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TNNI1P19237 187 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPD1P21695 349 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ALAS2P22557 587 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC6A2P23975 617 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 GTF2E2P29084 291 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 FMO4P31512 558 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SDC2P34741 201 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 EPHX2P34913 555 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SOX9P48436 509 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 NRIP1P48552 1158 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 VEGFCP49767 419 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 GSK3BP49841 420 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CLCNKAP51800 687 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 GPR143P51810 404 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 AKR1D1P51857 326 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PGDP52209 483 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms