RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 OTUD6BQ8N6M0 293 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 TEX19Q8NA77 164 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 OR8K5Q8NH50 307 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 OR1L3Q8NH93 324 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 THAP4Q8WY91 577 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 HDAC10Q969S8 669 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.58□□□□□ -0.4
VRK3-203ENST00000424804 ZNF778Q96MU6 729 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 PITPNM3Q9BZ71 974 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 PCMTD2Q9NV79 361 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 BFARQ9NZS9 450 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 TCAF1Q9Y4C2 921 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.58□□□□□ -0.4
VRK3-203ENST00000424804 ESPL1Q14674 2120 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 MROH6A6NGR9 719 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 H7C0S8 307 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 MEN1O00255 615 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 BTN3A1O00481 513 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 HCRTR1O43613 425 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 CPNE3O75131 537 aaKnown RBP12.57□□□□□ -0.4
VRK3-203ENST00000424804 SORBS2O94875 1100 aaKnown RBP12.57□□□□□ -0.4
VRK3-203ENST00000424804 GOT2P00505 430 aaKnown RBP12.57□□□□□ -0.4
VRK3-203ENST00000424804 RAB40ALP0C0E4 278 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 MSL3P1P0C860 447 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 GP1BBP13224 206 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 ATP1B2P14415 290 aaPredicted RBP12.57□□□□□ -0.4
VRK3-203ENST00000424804 ST6GAL1P15907 406 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 TCP1P17987 556 aaKnown RBP12.57□□□□□ -0.4
VRK3-203ENST00000424804 ACRV1P26436 265 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 PRDX3P30048 256 aaKnown RBP12.57□□□□□ -0.4
VRK3-203ENST00000424804 UQCRFS1P47985 274 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 GABRA4P48169 554 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 ITGA1P56199 1179 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 PPP1R7Q15435 360 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 DBN1Q16643 649 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 NADK2Q4G0N4 442 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 CASC4Q6P4E1 433 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 CYB5D1Q6P9G0 228 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 AFTPHQ6ULP2 937 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 CES3Q6UWW8 571 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 PIANPQ8IYJ0 282 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 ADGRF3Q8IZF5 1079 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 FAM26EQ8N5C1 309 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 CLDN19Q8N6F1 224 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 PHC3Q8NDX5 983 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 ACVR1CQ8NER5 493 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 FLVCR1-AS1Q8TAF5 88 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 HM13Q8TCT9 377 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 ACTRT1Q8TDG2 376 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 GRK7Q8WTQ7 553 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 HEXDCQ8WVB3 486 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 TRAPPC9Q96Q05 1148 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 NAPGQ99747 312 aaPredicted RBP12.57□□□□□ -0.4
VRK3-203ENST00000424804 CCM2Q9BSQ5 444 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 COG4Q9H9E3 785 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 EIF2B3Q9NR50 452 aaKnown RBP12.57□□□□□ -0.4
VRK3-203ENST00000424804 CHRAC1Q9NRG0 131 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 C1GALT1Q9NS00 363 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 ANAPC5Q9UJX4 755 aa12.57□□□□□ -0.4
VRK3-203ENST00000424804 PCDHGA9Q9Y5G4 932 aaKnown RBP12.57□□□□□ -0.4
VRK3-203ENST00000424804 CTAGE9A4FU28 777 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 ARGFXA6NJG6 315 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 SLC35G4P0C7Q5 338 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 TPSB2P20231 275 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 NDUFS1P28331 727 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 PTGIRP43119 386 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 NPY2RP49146 381 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 RPS15P62841 145 aaKnown RBP12.56□□□□□ -0.4
VRK3-203ENST00000424804 SARNPP82979 210 aaKnown RBP12.56□□□□□ -0.4
VRK3-203ENST00000424804 BOP1Q14137 746 aaKnown RBP12.56□□□□□ -0.4
VRK3-203ENST00000424804 KRT33BQ14525 404 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 BRD3Q15059 726 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 TPSAB1Q15661 275 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 FASTKD1Q53R41 847 aaKnown RBP12.56□□□□□ -0.4
VRK3-203ENST00000424804 PCID2Q5JVF3 399 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 ANKRD22Q5VYY1 191 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 FAM198BQ6UWH4 519 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 NLRP9Q7RTR0 991 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 TMEM126BQ8IUX1 230 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 TMEM151BQ8IW70 566 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 KLHL7Q8IXQ5 586 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 ZBTB2Q8N680 514 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 ENDOVQ8N8Q3 282 aaKnown RBP12.56□□□□□ -0.4
VRK3-203ENST00000424804 Q8NA96 180 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 OR52E1Q8NGJ3 308 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 OR13J1Q8NGT2 312 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 OR4L1Q8NH43 312 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 MR1Q95460 341 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 RANBP9Q96S59 729 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 TTC1Q99614 292 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 DDX47Q9H0S4 455 aaKnown RBP12.56□□□□□ -0.4
VRK3-203ENST00000424804 ING2Q9H160 280 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 TFB2MQ9H5Q4 396 aaKnown RBP12.56□□□□□ -0.4
VRK3-203ENST00000424804 SYBUQ9NX95 663 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 ASIC3Q9UHC3 531 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 MAP4K5Q9Y4K4 846 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 PRSS21Q9Y6M0 314 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 COLEC10Q9Y6Z7 277 aa12.56□□□□□ -0.4
VRK3-203ENST00000424804 UNC79Q9P2D8 2635 aa12.55□□□□□ -0.4
VRK3-203ENST00000424804 AP3B1O00203 1094 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms