RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 SIX4Q9UIU6 781 aa13.78□□□□□ -0.2
DENND3-202ENST00000424248 C9JVG2 144 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 KERAO60938 352 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 AP2A2O94973 939 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 YES1P07947 543 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 CCNYL3P0C7X3 344 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 IL18Q14116 193 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 TMEM44Q2T9K0 475 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 IFI44LQ53G44 452 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 RBM20Q5T481 1227 aaKnown RBP13.77□□□□□ -0.2
DENND3-202ENST00000424248 XKR5Q6UX68 686 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 CAND1Q86VP6 1230 aaKnown RBP13.77□□□□□ -0.2
DENND3-202ENST00000424248 CIR1Q86X95 450 aaPredicted RBP13.77□□□□□ -0.2
DENND3-202ENST00000424248 MOSPD2Q8NHP6 518 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 CLHC1Q8NHS4 586 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 RNF39Q9H2S5 420 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 TRPV5Q9NQA5 729 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 IMP3Q9NV31 184 aaKnown RBP13.77□□□□□ -0.2
DENND3-202ENST00000424248 ZDHHC7Q9NXF8 308 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 POLR1DQ9Y2S0 133 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 PCDHGA11Q9Y5H2 935 aa13.77□□□□□ -0.2
DENND3-202ENST00000424248 CCL22O00626 93 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 NRP1O14786 923 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 TLR1Q15399 786 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 IRAK1BP1Q5VVH5 260 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 SNX20Q7Z614 316 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 PEX5LQ8IYB4 626 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 TRUB1Q8WWH5 349 aaKnown RBP13.77□□□□□ -0.21
DENND3-202ENST00000424248 ACAT2Q9BWD1 397 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 TTLL2Q9BWV7 592 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 GPN1Q9HCN4 374 aaPredicted RBP13.77□□□□□ -0.21
DENND3-202ENST00000424248 FCF1Q9Y324 198 aaKnown RBP13.77□□□□□ -0.21
DENND3-202ENST00000424248 COL2A1P02458 1487 aaPredicted RBP13.77□□□□□ -0.21
DENND3-202ENST00000424248 NEMP2A6NFY4 417 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 MAGEB17A8MXT2 336 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 CCL16O15467 120 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 SLC28A2O43868 658 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 ENO2P09104 434 aaPredicted RBP13.77□□□□□ -0.21
DENND3-202ENST00000424248 ANXA4P09525 319 aaPredicted RBP13.77□□□□□ -0.21
DENND3-202ENST00000424248 MTHFD1P11586 935 aaKnown RBP13.77□□□□□ -0.21
DENND3-202ENST00000424248 MTPNP58546 118 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 ARMCX6Q7L4S7 300 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 AMIGO3Q86WK7 504 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 IGDCC3Q8IVU1 814 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 WFIKKN2Q8TEU8 576 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 ZNF514Q96K75 400 aaPredicted RBP13.77□□□□□ -0.21
DENND3-202ENST00000424248 CCDC177Q9NQR7 707 aaPredicted RBP13.77□□□□□ -0.21
DENND3-202ENST00000424248 PFDN2Q9UHV9 154 aa13.77□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3DA0A087WVF3 549 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3IA0A087WXS9 549 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3EA0A087X179 549 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3KA0A087X1G2 549 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 ISPDA4D126 451 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3FA6NER0 549 aaPredicted RBP13.76□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3LB9A6J9 549 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 J3QRK9 145 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 RSL1D1O76021 490 aaKnown RBP13.76□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3HP0C7X1 549 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 RORCP51449 518 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 CAP1Q01518 475 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 GALNT2Q10471 571 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 MTAPQ13126 283 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 CHIT1Q13231 466 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 CRHR2Q13324 411 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 MYLK3Q32MK0 819 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 CCDC157Q569K6 752 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3GQ6DHY5 549 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3CQ6IPX1 549 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 RGL4Q8IZJ4 473 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 TBC1D3Q8IZP1 549 aaPredicted RBP13.76□□□□□ -0.21
DENND3-202ENST00000424248 LIX1Q8N485 282 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 POMGNT2Q8NAT1 580 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 FBXL8Q96CD0 374 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 TNKS2Q9H2K2 1166 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 EIF2B4Q9UI10 523 aaKnown RBP13.76□□□□□ -0.21
DENND3-202ENST00000424248 SCML2Q9UQR0 700 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 MYH7BA7E2Y1 1941 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 NDUFB5O43674 189 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 CCNB2O95067 398 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 HLA-DQB2P05538 268 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 C8AP07357 584 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 CARTPTQ16568 116 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 FBXL22Q6P050 247 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 PRSS55Q6UWB4 352 aaPredicted RBP13.76□□□□□ -0.21
DENND3-202ENST00000424248 HACD2Q6Y1H2 254 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 ITPAQ9BY32 194 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 CCM2LQ9NUG4 571 aaPredicted RBP13.76□□□□□ -0.21
DENND3-202ENST00000424248 FAM92AA1XBS5 289 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 NOBOXO60393 691 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 SNNO75324 88 aaPredicted RBP13.76□□□□□ -0.21
DENND3-202ENST00000424248 CLK3P49761 638 aaKnown RBP13.76□□□□□ -0.21
DENND3-202ENST00000424248 NRLP54845 237 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 CCL14Q16627 93 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 DCST1Q5T197 706 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 DEF8Q6ZN54 512 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 MEIOBQ8N635 442 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 KREMEN2Q8NCW0 462 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 RFKQ969G6 155 aa13.76□□□□□ -0.21
DENND3-202ENST00000424248 PRICKLE1Q96MT3 831 aaPredicted RBP13.76□□□□□ -0.21
DENND3-202ENST00000424248 LPIN3Q9BQK8 851 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms