RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 M0R3G1 203 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 E2F3O00716 465 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 MYO1DO94832 1006 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 GJB5O95377 273 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 HMBSP08397 361 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 TPTEP56180 551 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 SIM2Q14190 667 aaPredicted RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 NR6A1Q15406 480 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 SMN1Q16637 294 aaKnown RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 PTPRNQ16849 979 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 C9orf50Q5SZB4 431 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 FAM171BQ6P995 826 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 MCOLN3Q8TDD5 553 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 EXOC2Q96KP1 924 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 ZNF558Q96NG5 402 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 SEPT5Q99719 369 aaPredicted RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 DERL2Q9GZP9 239 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 MIR1-1HGQ9H1L0 117 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 SLC6A13Q9NSD5 602 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 VNN3Q9NY84 501 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 CD274Q9NZQ7 290 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 ZIM2Q9NZV7 527 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 E2F6O75461 281 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 ITGB6P18564 788 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 TYMPP19971 482 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 MAGP20916 626 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 RAD51Q06609 339 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 MAPRE1Q15691 268 aaKnown RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 C6orf183Q5T699 404 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 ZCCHC7Q8N3Z6 543 aaKnown RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 FEM1AQ9BSK4 669 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 BTBD2Q9BX70 525 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 CRISPLD1Q9H336 500 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 TAS2R13Q9NYV9 303 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 SCHIP1Q9P0W5 487 aaPredicted RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 DNAJB9Q9UBS3 223 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 TMEFF2Q9UIK5 374 aaPredicted RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 ZMYM5Q9UJ78 669 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 TLL1O43897 1013 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 B3GALT4O96024 378 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 ITIH1P19827 911 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 ACVR1Q04771 509 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 SELENBP1Q13228 472 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 CDK5R2Q13319 367 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 ABRAXAS2Q15018 415 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 MS4A13Q5J8X5 152 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 RAP1GAP2Q684P5 730 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 RNF19BQ6ZMZ0 732 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 PIANPQ8IYJ0 282 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 UMODL1-AS1Q8N2C9 162 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 DPP10Q8N608 796 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 ZNF548Q8NEK5 533 aaPredicted RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 OR4K2Q8NGD2 314 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 METTL6Q8TCB7 284 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 HTRA1Q92743 480 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 RHBDF1Q96CC6 855 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 BTN2A3PQ96KV6 586 aa14.06□□□□□ -0.16
MSH5-206ENST00000423982 RC3H2Q9HBD1 1191 aaKnown RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.06□□□□□ -0.16
MSH5-206ENST00000423982 COL4A6Q14031 1691 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 SYCE1LA8MT33 242 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 PRMT5O14744 637 aaPredicted RBP14.05□□□□□ -0.16
MSH5-206ENST00000423982 ANKRD28O15084 1053 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 OAZ2O95190 189 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 TSPAN12O95859 305 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 OR1D2P34982 312 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 DCTP40126 519 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 AP5B1Q2VPB7 878 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 ZNF691Q5VV52 312 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 MSANTD2Q6P1R3 559 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 BEND5Q7L4P6 421 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 DET1Q7L5Y6 550 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 PJA1Q8NG27 643 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 CLHC1Q8NHS4 586 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 FAM162AQ96A26 154 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 PKMYT1Q99640 499 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 WDR12Q9GZL7 423 aaKnown RBP14.05□□□□□ -0.16
MSH5-206ENST00000423982 SLC25A37Q9NYZ2 338 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 GBF1Q92538 1859 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 ANKRD36A6QL64 1941 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 COL4A4P53420 1690 aaPredicted RBP14.05□□□□□ -0.16
MSH5-206ENST00000423982 GABARAPO95166 117 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 FADS2O95864 444 aaKnown RBP14.05□□□□□ -0.16
MSH5-206ENST00000423982 C1QCP02747 245 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 ZNF24P17028 368 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 PSMB9P28065 219 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 MASP1P48740 699 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 GRIK2Q13002 908 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 DUSP4Q13115 394 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 PWP1Q13610 501 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 SF3B4Q15427 424 aaKnown RBP eCLIP14.05□□□□□ -0.164e-9■■■■□ 20.4
MSH5-206ENST00000423982 BCL2A1Q16548 175 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 AGAP7PQ5VUJ5 663 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 PSAPL1Q6NUJ1 521 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 PLEKHG7Q6ZR37 379 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 ADCK1Q86TW2 530 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 MIB1Q86YT6 1006 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 MSRB3Q8IXL7 192 aa14.05□□□□□ -0.16
MSH5-206ENST00000423982 RAVER1Q8IY67 606 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms