RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 STX2P32856 288 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 SHMT2P34897 504 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 CCNFP41002 786 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 PPP1CAP62136 330 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 NAB1Q13506 487 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 UBAP2Q5T6F2 1119 aaKnown RBP17.91■□□□□ 0.46
HDAC6-205ENST00000423941 PHF19Q5T6S3 580 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 PAQR3Q6TCH7 311 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 UNQ6494/PRO21346Q6UXR6 183 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 OOSP2Q86WS3 158 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 CARFQ8N187 725 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 BMPERQ8N8U9 685 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 RCBTB1Q8NDN9 531 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 FLVCR1-AS1Q8TAF5 88 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 NXPE2Q96DL1 559 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 PDLIM5Q96HC4 596 aaKnown RBP17.91■□□□□ 0.46
HDAC6-205ENST00000423941 OLFM1Q99784 485 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 CMKLR1Q99788 373 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 TXLNGYQ9BZA5 131 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 B3GNT4Q9C0J1 378 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 CDC42EP4Q9H3Q1 356 aaKnown RBP17.91■□□□□ 0.46
HDAC6-205ENST00000423941 ASCL3Q9NQ33 180 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 OR6C2Q9NZP2 312 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 POMT2Q9UKY4 750 aa17.91■□□□□ 0.46
HDAC6-205ENST00000423941 DMXL2Q8TDJ6 3036 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 CDRT15L2A8MXV6 281 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 BTN3A1O00481 513 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 KIF1CO43896 1103 aaKnown RBP17.9■□□□□ 0.46
HDAC6-205ENST00000423941 WISP3O95389 354 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-205ENST00000423941 MPOP05164 745 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 ERGP11308 486 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 DEKP35659 375 aaKnown RBP17.9■□□□□ 0.46
HDAC6-205ENST00000423941 GP5P40197 560 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 TUBB4BP68371 445 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 GABREP78334 506 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 LRRC8EQ6NSJ5 796 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 CPNE9Q8IYJ1 553 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 LSMEM2Q8N112 164 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 FBXO39Q8N4B4 442 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 KDF1Q8NAX2 398 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-205ENST00000423941 AGBL5Q8NDL9 886 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 HMGCLL1Q8TB92 370 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 EEF1AKMT1Q8WVE0 214 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 RAD51AP1Q96B01 352 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 VPS39Q96JC1 886 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 FOPNLQ96NB1 174 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 TGM7Q96PF1 710 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 RBBP8Q99708 897 aa17.9■□□□□ 0.46
HDAC6-205ENST00000423941 ZNF768Q9H5H4 540 aaKnown RBP17.9■□□□□ 0.46
HDAC6-205ENST00000423941 TRMT6Q9UJA5 497 aaKnown RBP17.9■□□□□ 0.46
HDAC6-205ENST00000423941 RUVBL2Q9Y230 463 aaKnown RBP17.9■□□□□ 0.46
HDAC6-205ENST00000423941 PCM1Q15154 2024 aa17.89■□□□□ 0.46
HDAC6-205ENST00000423941 WDFY3Q8IZQ1 3526 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 FAM95CA0A1B0GW59 222 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 TMEM8BA6NDV4 472 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 ARHGEF33A8MVX0 844 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 PRICKLE3O43900 615 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-205ENST00000423941 KDM1AO60341 852 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 FGF3P11487 239 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-205ENST00000423941 POLR2CP19387 275 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-205ENST00000423941 MCM3P25205 808 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 TNFRSF8P28908 595 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 PKLRP30613 574 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 RAB28P51157 221 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 KPNA2P52292 529 aaKnown RBP17.89■□□□□ 0.45
HDAC6-205ENST00000423941 TAS2R39P59534 338 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 CYP4F3Q08477 520 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 SLMAPQ14BN4 828 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 CCSMST1Q4G0I0 132 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 C3orf38Q5JPI3 329 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 GRTP1Q5TC63 336 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 TMEM207Q6UWW9 146 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 CLEC14AQ86T13 490 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 GPATCH11Q8N954 259 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 LINC01555Q8NAE3 123 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 CFAP61Q8NHU2 1237 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 MAGEC3Q8TD91 643 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 UBXN4Q92575 508 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 SLC41A2Q96JW4 573 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 GPR22Q99680 433 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 PITPNM3Q9BZ71 974 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 XKR8Q9H6D3 395 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 ACSS3Q9H6R3 686 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 ANKZF1Q9H8Y5 726 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 POPDC3Q9HBV1 291 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 SIDT1Q9NXL6 827 aaKnown RBP17.89■□□□□ 0.45
HDAC6-205ENST00000423941 TDRKHQ9Y2W6 561 aaKnown RBP17.89■□□□□ 0.45
HDAC6-205ENST00000423941 MTO1Q9Y2Z2 717 aaKnown RBP17.89■□□□□ 0.45
HDAC6-205ENST00000423941 LOXL2Q9Y4K0 774 aa17.89■□□□□ 0.45
HDAC6-205ENST00000423941 IGHV5-51A0A0C4DH38 117 aa17.88■□□□□ 0.45
HDAC6-205ENST00000423941 TLCD2A6NGC4 264 aa17.88■□□□□ 0.45
HDAC6-205ENST00000423941 B4E171 279 aa17.88■□□□□ 0.45
HDAC6-205ENST00000423941 MYO1CO00159 1063 aa17.88■□□□□ 0.45
HDAC6-205ENST00000423941 RASGRF2O14827 1237 aa17.88■□□□□ 0.45
HDAC6-205ENST00000423941 SNRNP200O75643 2136 aaKnown RBP17.88■□□□□ 0.45
HDAC6-205ENST00000423941 ITGA2BP08514 1039 aa17.88■□□□□ 0.45
HDAC6-205ENST00000423941 CHRM5P08912 532 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-205ENST00000423941 FAM153BP0C7A2 387 aa17.88■□□□□ 0.45
HDAC6-205ENST00000423941 CCL4P13236 92 aa17.88■□□□□ 0.45
HDAC6-205ENST00000423941 PRDX3P30048 256 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms