RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TPBGLP0DKB5 382 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 FNTAP49354 379 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 VPS41P49754 854 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 SESN2P58004 480 aaPredicted RBP14.71□□□□□ -0.05
USB1-202ENST00000423271 PRAMEP78395 509 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 CRADDP78560 199 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 LAMB3Q13751 1172 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 ZNF789Q5FWF6 425 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 C4orf22Q6V702 233 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 ATG14Q6ZNE5 492 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 PPHLN1Q8NEY8 458 aaKnown RBP14.71□□□□□ -0.05
USB1-202ENST00000423271 OR8K5Q8NH50 307 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 OR1L3Q8NH93 324 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 MR1Q95460 341 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 ABHD17AQ96GS6 310 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 TRAPPC9Q96Q05 1148 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 TWSG1Q9GZX9 223 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 CHRAC1Q9NRG0 131 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 LATS2Q9NRM7 1088 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 PLAGL1Q9UM63 463 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 NEU2Q9Y3R4 380 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 NBASA2RRP1 2371 aa14.71□□□□□ -0.05
USB1-202ENST00000423271 PIPSLA2A3N6 862 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 IQCF5A8MTL0 148 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 C2orf74A8MZ97 194 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 TMEM150CB9EJG8 249 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 PAFAH1B1P43034 410 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 BASP1P80723 227 aaKnown RBP14.7□□□□□ -0.06
USB1-202ENST00000423271 FASTKD1Q53R41 847 aaKnown RBP14.7□□□□□ -0.06
USB1-202ENST00000423271 LYPLAL1Q5VWZ2 237 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 LCN10Q6JVE6 187 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 SPESP1Q6UW49 350 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 UNC5AQ6ZN44 842 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 CDHR3Q6ZTQ4 885 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 NLRP9Q7RTR0 991 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 VRK3Q8IV63 474 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 GRK7Q8WTQ7 553 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 CHST8Q9H2A9 424 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 FANCEQ9HB96 536 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 EIF2B3Q9NR50 452 aaKnown RBP14.7□□□□□ -0.06
USB1-202ENST00000423271 SPHK1Q9NYA1 384 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 RNF14Q9UBS8 474 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 POLHQ9Y253 713 aa14.7□□□□□ -0.06
USB1-202ENST00000423271 TDRKHQ9Y2W6 561 aaKnown RBP14.7□□□□□ -0.06
USB1-202ENST00000423271 FER1L5A0AVI2 2057 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 K7EM74 188 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 WISP1O95388 367 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 UGT2B7P16662 529 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 NR1D1P20393 614 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 PTPN4P29074 926 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 CCR7P32248 378 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 SHMT2P34897 504 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 TERF1P54274 439 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 GPS1Q13098 491 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 IL10RAQ13651 578 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 ZIC1Q15915 447 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 PCID2Q5JVF3 399 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 COLEC12Q5KU26 742 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 PLEKHS1Q5SXH7 462 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 ZNF517Q6ZMY9 492 aaPredicted RBP14.69□□□□□ -0.06
USB1-202ENST00000423271 KLHL7Q8IXQ5 586 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 TBC1D21Q8IYX1 336 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 KRT222Q8N1A0 295 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 OR5K2Q8NHB8 316 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 FLVCR1-AS1Q8TAF5 88 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 CPT1BQ92523 772 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 SGSM3Q96HU1 749 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 OR2A14Q96R47 310 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 TTC1Q99614 292 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 FAM60AQ9NP50 221 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 TREX1Q9NSU2 369 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 CATSPERZQ9NTU4 200 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 PCMTD2Q9NV79 361 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 CDYLQ9Y232 598 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 TP53TG5Q9Y2B4 290 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 MAN2B2Q9Y2E5 1009 aa14.69□□□□□ -0.06
USB1-202ENST00000423271 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.68□□□□□ -0.06
USB1-202ENST00000423271 TCRBV7S3A2A0A539 114 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 MEN1O00255 615 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 HCRTR1O43613 425 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 DNAJB5O75953 348 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 CHRM5P08912 532 aaPredicted RBP14.68□□□□□ -0.06
USB1-202ENST00000423271 MSL3P1P0C860 447 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 CYP2A7P20853 494 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 NMBRP28336 390 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 PEBP1P30086 187 aaKnown RBP14.68□□□□□ -0.06
USB1-202ENST00000423271 RORAP35398 523 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 TLE1Q04724 770 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 HSPA14Q0VDF9 509 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 DEFB110Q30KQ9 67 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 LACTB2Q53H82 288 aaPredicted RBP14.68□□□□□ -0.06
USB1-202ENST00000423271 FAM69BQ5VUD6 431 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 SLC22A15Q8IZD6 547 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 DSELQ8IZU8 1212 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 C19orf47Q8N9M1 422 aaKnown RBP14.68□□□□□ -0.06
USB1-202ENST00000423271 LMNTD1Q8N9Z9 388 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 PEX13Q92968 403 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 CLIP3Q96DZ5 547 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 LRFN5Q96NI6 719 aa14.68□□□□□ -0.06
USB1-202ENST00000423271 GPR87Q9BY21 358 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms