RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 SLCO2A1Q92959 643 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 LPPQ93052 612 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 CENPNQ96H22 339 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TEKT5Q96M29 485 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TRNT1Q96Q11 434 aaKnown RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 PCDHB18PQ96TA0 734 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 VAT1Q99536 393 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 FEM1AQ9BSK4 669 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TTPALQ9BTX7 342 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 YTHDF1Q9BYJ9 559 aaKnown RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TNKS2Q9H2K2 1166 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 DPEP3Q9H4B8 488 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 KAT8Q9H7Z6 458 aaKnown RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 GPN2Q9H9Y4 310 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 IL21Q9HBE4 155 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 FAM49BQ9NUQ9 324 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 EXD2Q9NVH0 621 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 MID2Q9UJV3 735 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 PCDHB4Q9Y5E5 795 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 CCDC154A6NI56 674 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 LOC730098B7Z3J9 87 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 RNF103O00237 685 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 BTN3A1O00481 513 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 FAM20BO75063 409 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 SOAT2O75908 522 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 PROSCO94903 275 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ECDO95905 644 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 CYBBP04839 570 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ITGB3P05106 788 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 CYP2A6P11509 494 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 HOXB8P17481 243 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 AKAP5P24588 427 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 HTR7P34969 479 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 RPL22P35268 128 aaKnown RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 GRK3P35626 688 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TALDO1P37837 337 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ETV4P43268 484 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 SESN2P58004 480 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 FMO1Q01740 532 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 KCNC4Q03721 635 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ABRQ12979 859 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TRIP4Q15650 581 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 MEP1AQ16819 746 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 AAK1Q2M2I8 961 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 SMTNL2Q2TAL5 461 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 BCL7AQ4VC05 210 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 MSS51Q4VC12 460 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 VARS2Q5ST30 1063 aaKnown RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 RNASEH2BQ5TBB1 312 aaKnown RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 CYP4A22Q5TCH4 519 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ZNF704Q6ZNC4 412 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TMPRSS9Q7Z410 1059 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 PSTKQ8IV42 348 aaKnown RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 EID3Q8N140 333 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 EMC1Q8N766 993 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ZNF781Q8N8C0 355 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ANKRD52Q8NB46 1076 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ZNF461Q8TAF7 563 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TEX47Q8TBZ9 253 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 POF1BQ8WVV4 589 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ST8SIA4Q92187 359 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 HDAC10Q969S8 669 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 PSMG2Q969U7 264 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 MARC2Q969Z3 335 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TMCO6Q96DC7 493 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 KIF12Q96FN5 646 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 LMLNQ96KR4 655 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 SENP8Q96LD8 212 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ZNF416Q9BWM5 594 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 B3GNT5Q9BYG0 378 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 SPAG4Q9NPE6 437 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 INTS7Q9NVH2 962 aaKnown RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 SPATA6Q9NWH7 488 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 NSMCE4AQ9NXX6 385 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 CLEC1BQ9P126 229 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ADGRE2Q9UHX3 823 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ZNF222Q9UK12 451 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ING4Q9UNL4 249 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 HRH3Q9Y5N1 445 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TRAV6A0A075B6T7 132 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 CIB4A0PJX0 185 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 MTMR11A4FU01 709 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 EFCAB10A6NFE3 127 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 HS6ST1O60243 411 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 SLITRK5O94991 958 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 APOL3O95236 402 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 FOSL2P15408 326 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 ITGA2P17301 1181 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 IGFBP6P24592 240 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 MPSTP25325 297 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 L1CAMP32004 1257 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 NUP62P37198 522 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 NPY2RP49146 381 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 GATMP50440 423 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TAS2R40P59535 323 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 NOMO3P69849 1222 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 DEFA5Q01523 94 aa4.79□□□□□ -1.64
ITGB1-205ENST00000423113 GRSF1Q12849 480 aaKnown RBP eCLIP4.79□□□□□ -1.64
ITGB1-205ENST00000423113 TARDBPQ13148 414 aaKnown RBP eCLIP4.79□□□□□ -1.645e-7■■■■□ 21
ITGB1-205ENST00000423113 CCDC142Q17RM4 750 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms