RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ICKQ9UPZ9 632 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 COPG1Q9Y678 874 aaKnown RBP16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 DOPEY1Q5JWR5 2465 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 ITPR2Q14571 2701 aa16.29■□□□□ 0.2
UPF3AP3-201ENST00000420996 CCL22O00626 93 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 MFAP3LO75121 409 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 ACRV1P26436 265 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 PSMB4P28070 264 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 MC4RP32245 332 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 SHMT2P34897 504 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 MARCKSL1P49006 195 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 CDKN1CP49918 316 aaPredicted RBP16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 ELOAQ14241 798 aaKnown RBP16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 ZIC1Q15915 447 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 CCDC181Q5TID7 509 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 C1orf189Q5VU69 101 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 UNC5AQ6ZN44 842 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 SERPINA9Q86WD7 417 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 VSTM4Q8IW00 320 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 ZADH2Q8N4Q0 377 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 TTC13Q8NBP0 860 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 PPP1R2P1Q96PQ5 205 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 OR2A14Q96R47 310 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 NDOR1Q9UHB4 597 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 FEZ2Q9UHY8 353 aaPredicted RBP16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 SRPK3Q9UPE1 567 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 NUP210LQ5VU65 1888 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 PCM1Q15154 2024 aa16.28■□□□□ 0.2
UPF3AP3-201ENST00000420996 MDC1Q14676 2089 aaKnown RBP16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 H7C0S8 307 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 HCRTR1O43613 425 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 UGT2B7P16662 529 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 COPS2P61201 443 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 DEFB110Q30KQ9 67 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 TLDC1Q6P9B6 456 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 Q6ZS92 163 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 TAS2R42Q7RTR8 314 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 TRIM73Q86UV7 250 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 CDKL3Q8IVW4 592 aaPredicted RBP16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 CLDN19Q8N6F1 224 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 ACTL9Q8TC94 416 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 INPP5DQ92835 1189 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 DNAJC1Q96KC8 554 aaKnown RBP16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 TBL1YQ9BQ87 522 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 ATP13A2Q9NQ11 1180 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 DHCR7Q9UBM7 475 aaKnown RBP16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 CDYLQ9Y232 598 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 EFR3BQ9Y2G0 817 aa16.27■□□□□ 0.2
UPF3AP3-201ENST00000420996 LIN7AO14910 233 aaPredicted RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 ZSCAN9O15535 394 aaPredicted RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 CNOT3O75175 753 aaKnown RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 SNRNP200O75643 2136 aaKnown RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 STK10O94804 968 aaKnown RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 AP2A2O94973 939 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 CHRM5P08912 532 aaPredicted RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 GLRBP48167 497 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 OTUD4Q01804 1114 aaKnown RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 NKAIN1Q4KMZ8 207 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 MRPL14Q6P1L8 145 aaKnown RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 PPP1R32Q7Z5V6 425 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 TBC1D21Q8IYX1 336 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 ZNF655Q8N720 491 aaPredicted RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 OR5AR1Q8NGP9 310 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 FLVCR1-AS1Q8TAF5 88 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 KRT35Q92764 455 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 SPATA13Q96N96 652 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 TXLNGQ9NUQ3 528 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 NLE1Q9NVX2 485 aaPredicted RBP16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 SPHK1Q9NYA1 384 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 OR6C2Q9NZP2 312 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 POLG2Q9UHN1 485 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 ASF1AQ9Y294 204 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 NTNG1Q9Y2I2 539 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 PCDHGA10Q9Y5H3 936 aa16.26■□□□□ 0.19
UPF3AP3-201ENST00000420996 A0A0J9YY10 115 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 AGPSO00116 658 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 KCNN4O15554 427 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 UMODP07911 640 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 RBP3P10745 1247 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 ACADLP28330 430 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 MAGEA1P43355 309 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 EIF3EP60228 445 aaKnown RBP16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 AIMP2Q13155 320 aaKnown RBP16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 SPARCL1Q14515 664 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 CYP2A13Q16696 494 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 C11orf63Q6NUN7 778 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 DARS2Q6PI48 645 aaKnown RBP16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 CUZD1Q86UP6 607 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 TICAM1Q8IUC6 712 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 KLHDC8BQ8IXV7 354 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 DNAJC22Q8N4W6 341 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 CCDC110Q8TBZ0 833 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 UBE2Q2Q8WVN8 375 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 NACC2Q96BF6 587 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 LRRC45Q96CN5 670 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 ZBTB20Q9HC78 741 aaPredicted RBP16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 AGPAT4Q9NRZ5 378 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 PLCL2Q9UPR0 1127 aa16.25■□□□□ 0.19
UPF3AP3-201ENST00000420996 DOCK10Q96BY6 2186 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms