RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 IQCF5A8MTL0 148 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 C2orf74A8MZ97 194 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 GOLGA6L6A8MZA4 724 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 E7EVH7 732 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 FGGP02679 453 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 CCDC175P0C221 793 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 OR56A5P0C7T3 313 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 UGT2B7P16662 529 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 NR1D1P20393 614 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 ARNTP27540 789 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 PTPN4P29074 926 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 CRADDP78560 199 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 GRB7Q14451 532 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 UGT8Q16880 541 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 PCID2Q5JVF3 399 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 TMTC4Q5T4D3 741 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 LYPLAL1Q5VWZ2 237 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 IZUMO3Q5VZ72 239 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 SPESP1Q6UW49 350 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 FAM198BQ6UWH4 519 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 NLRP9Q7RTR0 991 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 TRIM73Q86UV7 250 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 SLC22A15Q8IZD6 547 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 PRELID2Q8N945 189 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 CCDC89Q8N998 374 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 C9orf43Q8TAL5 461 aaPredicted RBP10.68□□□□□ -0.7
SSBP3-206ENST00000420121 ADAMTS17Q8TE56 1095 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 ALS2CR12Q96Q35 445 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 AP1M1Q9BXS5 423 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 GPR87Q9BY21 358 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 TRIM55Q9BYV6 548 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 EPN3Q9H201 632 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 P2RY12Q9H244 342 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 CHST8Q9H2A9 424 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 PCMTD2Q9NV79 361 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 PLAGL1Q9UM63 463 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 ASF1AQ9Y294 204 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 ZKSCAN5Q9Y2L8 839 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 PCM1Q15154 2024 aa10.68□□□□□ -0.7
SSBP3-206ENST00000420121 PIPSLA2A3N6 862 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 TMEM150CB9EJG8 249 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 MEN1O00255 615 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 GAS8O95995 478 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 PDGFAP04085 211 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 CTSBP07858 339 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 CHRM5P08912 532 aaPredicted RBP10.67□□□□□ -0.7
SSBP3-206ENST00000420121 NMBRP28336 390 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 CXCR5P32302 372 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 SHMT2P34897 504 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 CSRP3P50461 194 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 PMS2P54278 862 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 CSE1LP55060 971 aaKnown RBP10.67□□□□□ -0.7
SSBP3-206ENST00000420121 SESN2P58004 480 aaPredicted RBP10.67□□□□□ -0.7
SSBP3-206ENST00000420121 TLE1Q04724 770 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 FASTKD1Q53R41 847 aaKnown RBP10.67□□□□□ -0.7
SSBP3-206ENST00000420121 FAM69BQ5VUD6 431 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 ZNF449Q6P9G9 518 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 SYVN1Q86TM6 617 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 APLFQ8IW19 511 aaPredicted RBP10.67□□□□□ -0.7
SSBP3-206ENST00000420121 KRT222Q8N1A0 295 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 C19orf47Q8N9M1 422 aaKnown RBP10.67□□□□□ -0.7
SSBP3-206ENST00000420121 LMNTD1Q8N9Z9 388 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 LINC01555Q8NAE3 123 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 PPHLN1Q8NEY8 458 aaKnown RBP10.67□□□□□ -0.7
SSBP3-206ENST00000420121 OR6P1Q8NGX9 317 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 MR1Q95460 341 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.67□□□□□ -0.7
SSBP3-206ENST00000420121 CARD6Q9BX69 1037 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 CHRNA10Q9GZZ6 450 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 CLMPQ9H6B4 373 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 SYTL2Q9HCH5 934 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 CATSPERZQ9NTU4 200 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 FARSAQ9Y285 508 aaKnown RBP10.67□□□□□ -0.7
SSBP3-206ENST00000420121 TP53TG5Q9Y2B4 290 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 COL12A1Q99715 3063 aa10.67□□□□□ -0.7
SSBP3-206ENST00000420121 HEATR5BQ9P2D3 2071 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 PRMT5O14744 637 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-206ENST00000420121 CD3EAPO15446 510 aaKnown RBP10.66□□□□□ -0.7
SSBP3-206ENST00000420121 DNAJB5O75953 348 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 SLCO2B1O94956 709 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 RAB40ALP0C0E4 278 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 TPSB2P20231 275 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 AOAHP28039 575 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 PKLRP30613 574 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 CASRP41180 1078 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 PRAMEP78395 509 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 PLOD1Q02809 727 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-206ENST00000420121 TPSAB1Q15661 275 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 KYNUQ16719 465 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 DEFB110Q30KQ9 67 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 COLEC12Q5KU26 742 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 CPZQ66K79 652 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 TCTN3Q6NUS6 607 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 TTC27Q6P3X3 843 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 FAM20CQ8IXL6 584 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 SYTL1Q8IYJ3 562 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 ENDOVQ8N8Q3 282 aaKnown RBP10.66□□□□□ -0.7
SSBP3-206ENST00000420121 TRIM58Q8NG06 486 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 CPT1BQ92523 772 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 MFSD3Q96ES6 412 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms