RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ARL13AQ5H913 290 aaPredicted RBP13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 CFAP157Q5JU67 520 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 RNF165Q6ZSG1 346 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 CHST15Q7LFX5 561 aaPredicted RBP13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 LRRC70Q7Z2Q7 622 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 CPLX4Q7Z7G2 160 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 CRLF3Q8IUI8 442 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 DCUN1D3Q8IWE4 304 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 ANKS4BQ8N8V4 417 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 BCAS4Q8TDM0 211 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 TFGQ92734 400 aaPredicted RBP13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 RAD51AP1Q96B01 352 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 HSPA12BQ96MM6 686 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 SLC6A18Q96N87 628 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 MYOCQ99972 504 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 CD244Q9BZW8 370 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 TWSG1Q9GZX9 223 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 STN1Q9H668 368 aaKnown RBP13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 MVB12BQ9H7P6 319 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 MRPL40Q9NQ50 206 aaKnown RBP13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 TM7SF3Q9NS93 570 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 ARL15Q9NXU5 204 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 KLHL14Q9P2G3 628 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 POLG2Q9UHN1 485 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 EIF2B4Q9UI10 523 aaKnown RBP13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 PCTPQ9UKL6 214 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 PNMA8BQ9ULN7 279 aaPredicted RBP13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 CA5BQ9Y2D0 317 aa13.9□□□□□ -0.19
SHMT1P1-201ENST00000419974 SPTBN4Q9H254 2564 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 PABPN1LA6NDY0 278 aaKnown RBP13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 MEI4A8MW99 385 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 CSF2P04141 144 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 WNT1P04628 370 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 NME1P15531 152 aaKnown RBP13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 NDUFS1P28331 727 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 PBLDP30039 288 aaPredicted RBP13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 FNTBP49356 437 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 NXPH1P58417 271 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 CLCQ05315 142 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 ABRQ12979 859 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 E2F2Q14209 437 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 ATG14Q6ZNE5 492 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZCCHC23Q6ZST2 131 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 OR9A1PQ8NGU1 263 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 OR56A3Q8NH54 315 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 HMGCLL1Q8TB92 370 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 FAR2Q96K12 515 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZNF382Q96SR6 550 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 NTMT1Q9BV86 223 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 TRIM55Q9BYV6 548 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 SLC32A1Q9H598 525 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 AASDHPPTQ9NRN7 309 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 SPATA7Q9P0W8 599 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 VTI1BQ9UEU0 232 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 PRKAB1Q9Y478 270 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 GPSM3Q9Y4H4 160 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 ST14Q9Y5Y6 855 aa13.89□□□□□ -0.19
SHMT1P1-201ENST00000419974 OR5K4A6NMS3 321 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 ZNF839A8K0R7 811 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 K7EPI3 171 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 BCAT2O15382 392 aaPredicted RBP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 ITM2AO43736 263 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 UGDHO60701 494 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 KATNA1O75449 491 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 STK16O75716 305 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 SUPT7LO94864 414 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 TROVE2P10155 538 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 CCND1P24385 295 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 EEF1DP29692 281 aaKnown RBP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 RPL14P50914 215 aaKnown RBP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 PKNOX1P55347 436 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 ILF3Q12906 894 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 CDC16Q13042 620 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 GRB7Q14451 532 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 CYP2A13Q16696 494 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 GKAP1Q5VSY0 366 aaPredicted RBP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 CGB2Q6NT52 195 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 NRROSQ86YC3 692 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 WDR75Q8IWA0 830 aaKnown RBP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 SKA2Q8WVK7 121 aaPredicted RBP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 TSACCQ96A04 125 aaPredicted RBP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 MAGEB10Q96LZ2 347 aaPredicted RBP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 RMDN2Q96LZ7 410 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 CCT7Q99832 543 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 PLCD4Q9BRC7 762 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 TMEM79Q9BSE2 394 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 MENTQ9BUN1 341 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 GSDMCQ9BYG8 508 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 TRIT1Q9H3H1 467 aaKnown RBP13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 SUSD2Q9UGT4 822 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 GPR179Q6PRD1 2367 aa13.88□□□□□ -0.19
SHMT1P1-201ENST00000419974 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 A0A1B0GTW7 788 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 MATN2O00339 956 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 NDUFAB1O14561 156 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 KDM1AO60341 852 aa13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 SIX3O95343 332 aaPredicted RBP13.87□□□□□ -0.19
SHMT1P1-201ENST00000419974 ESRRBO95718 433 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms