RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 ACDQ96AP0 544 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ISG20Q96AZ6 181 aaKnown RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ITCHQ96J02 903 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HMX1Q9NP08 348 aaPredicted RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TRPS1Q9UHF7 1281 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 BACE2Q9Y5Z0 518 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZFC3H1O60293 1989 aaKnown RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 OR56A5P0C7T3 313 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DCKP27707 260 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TPGS1Q6ZTW0 290 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FKBP9P1Q75LS8 142 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 R3HCC1LQ7Z5L2 792 aaKnown RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZBTB46Q86UZ6 589 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ANKRD46Q86W74 232 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 NXPE1Q8N323 547 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 LKAAEAR1Q8TD35 194 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 WBP2Q969T9 261 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CCDC115Q96NT0 180 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ELOVL2Q9NXB9 296 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZNF639Q9UID6 485 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CPQQ9Y646 472 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PRSS21Q9Y6M0 314 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MYO1GB0I1T2 1018 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TAPBPO15533 448 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FZD6O60353 706 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FOXD2O60548 495 aaPredicted RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ABCB7O75027 752 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CD160O95971 181 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SERPINA1P01009 418 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 IL7RP16871 459 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 BPIP17213 487 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 IL5RAQ01344 420 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SEMG2Q02383 582 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 BNIP3Q12983 259 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SMU1Q2TAY7 513 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MBOAT1Q6ZNC8 495 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 UBE2R2Q712K3 238 aaPredicted RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZNF548Q8NEK5 533 aaPredicted RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DNAJB8Q8NHS0 232 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RAB2BQ8WUD1 216 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 POP5Q969H6 163 aaKnown RBP11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 EID2BQ96D98 161 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SLC29A3Q9BZD2 475 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 NTN4Q9HB63 628 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 GMEB1Q9Y692 573 aa11.45□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RFXANKO14593 260 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CREG1O75629 220 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 BCKDHAP12694 445 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 BOP1Q14137 746 aaKnown RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RFX4Q33E94 735 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TPGS2Q68CL5 300 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 USP51Q70EK9 711 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 USP45Q70EL2 814 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DET1Q7L5Y6 550 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DEFB128Q7Z7B8 93 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FNDC8Q8TC99 324 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 BCL7CQ8WUZ0 217 aaPredicted RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ASPSCR1Q9BZE9 553 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SLC32A1Q9H598 525 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FAM118AQ9NWS6 357 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SRRDQ9UH36 339 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ANKRD28O15084 1053 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SMAD6O43541 496 aaKnown RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 LRATO95237 230 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HOXB6P17509 224 aaKnown RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HALP42357 657 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 OCA2Q04671 838 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TOP3AQ13472 1001 aaPredicted RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SPIDRQ14159 915 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SKIV2LQ15477 1246 aaKnown RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FXNQ16595 210 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TXNDC8Q6A555 127 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 XKR5Q6UX68 686 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 METTL3Q86U44 580 aaKnown RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ARL10Q8N8L6 244 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SLC22A17Q8WUG5 538 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 NTMT1Q9BV86 223 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SH3PXD2BA1X283 911 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PQBP1O60828 265 aaKnown RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SOCS5O75159 536 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PRPS2P11908 318 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZNF182P17025 639 aaPredicted RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TMBIM6P55061 237 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SNRPD1P62314 119 aaKnown RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 KCNAB2Q13303 367 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 GTDC1Q4AE62 458 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MACC1Q6ZN28 852 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HIPK1Q86Z02 1210 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 GALNT13Q8IUC8 556 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 APCDD1Q8J025 514 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FAM86B1Q8N7N1 296 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 OR5K1Q8NHB7 308 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RNF217Q8TC41 542 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 GIPC3Q8TF64 312 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MRPS31Q92665 395 aaKnown RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HDAC2Q92769 488 aaKnown RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CCDC97Q96F63 343 aaPredicted RBP11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FAM8A1Q9UBU6 413 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PLXNA3P51805 1871 aa11.44□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FKBP9O95302 570 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms