RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 SRMSQ9H3Y6 488 aa17.02■□□□□ 0.32
COMMD3-BMI1-201ENST00000417470 HRASLS2Q9NWW9 162 aa17.02■□□□□ 0.32
COMMD3-BMI1-201ENST00000417470 NFS1Q9Y697 457 aa17.02■□□□□ 0.32
COMMD3-BMI1-201ENST00000417470 CCDC187A0A096LP49 1063 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 FAM153BP0C7A2 387 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ABCG1P45844 678 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 RAB28P51157 221 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 PMS2P54278 862 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 PDAP1Q13442 181 aaKnown RBP17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 FAM153CQ494X1 144 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 WDR93Q6P2C0 686 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 PRSS42Q7Z5A4 293 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 CPNE9Q8IYJ1 553 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 CFAP61Q8NHU2 1237 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 WDR36Q8NI36 951 aaKnown RBP17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 UBXN4Q92575 508 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ATXN7L3BQ96GX2 97 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ELMO2Q96JJ3 720 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 RAB11FIP5Q9BXF6 653 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 SYTL2Q9HCH5 934 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TMEM9Q9P0T7 183 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ICKQ9UPZ9 632 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 MTO1Q9Y2Z2 717 aaKnown RBP17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 PCDHGA8Q9Y5G5 932 aa17.01■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 A0A087WUV0 522 aaPredicted RBP17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 OR6C74A6NCV1 312 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 SLC16A5O15375 505 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ACSL3O95573 720 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TSPAN12O95859 305 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 CATP04040 527 aaKnown RBP17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 MYBL2P10244 700 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 MCM3P25205 808 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 MLLT3P42568 568 aaPredicted RBP17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 LSSP48449 732 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TAS2R39P59534 338 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 IL2P60568 153 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 PRKAA1Q13131 559 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 MARCH9Q86YJ5 346 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ADGRF3Q8IZF5 1079 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 NKAPQ8N5F7 415 aaKnown RBP17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 HMGCLL1Q8TB92 370 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 EEF1AKMT1Q8WVE0 214 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 SKA2Q8WVK7 121 aaPredicted RBP17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 JPH3Q8WXH2 748 aaPredicted RBP17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 GATA6Q92908 595 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TSPAN17Q96FV3 270 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 CCDC74BQ96LY2 380 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 CMKLR1Q99788 373 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TMEM121BQ9BXQ6 578 aaPredicted RBP17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 AKAP7Q9P0M2 348 aaPredicted RBP17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 SPATA7Q9P0W8 599 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TDRKHQ9Y2W6 561 aaKnown RBP17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 CEP295Q9C0D2 2601 aa17■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TRABD2BA6NFA1 517 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 MYO1CO00159 1063 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 BTN3A3O00478 584 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 RASGRF2O14827 1237 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 RIPK2O43353 540 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ZBTB14O43829 449 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 DXOO77932 396 aaKnown RBP16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 WISP3O95389 354 aaPredicted RBP16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 C8GP07360 202 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ERGP11308 486 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ZNF37AP17032 561 aaPredicted RBP16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 PKLRP30613 574 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 HSD17B2P37059 387 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 PPM1FP49593 454 aaPredicted RBP16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 GFERP55789 205 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 SP140Q13342 867 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ARHGAP19Q14CB8 494 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ZKSCAN8Q15776 578 aaPredicted RBP16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 UBAP2Q5T6F2 1119 aaKnown RBP16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 PHF19Q5T6S3 580 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ARMC6Q6NXE6 501 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TMEM207Q6UWW9 146 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 RAB11FIP2Q7L804 512 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 LSMEM2Q8N112 164 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 CNPY4Q8N129 248 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 MYO1HQ8N1T3 1032 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 SLC44A1Q8WWI5 657 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 KLHL6Q8WZ60 621 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TGM7Q96PF1 710 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 SLC12A9Q9BXP2 914 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 B3GNT4Q9C0J1 378 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ZNF768Q9H5H4 540 aaKnown RBP16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 POLR1BQ9H9Y6 1135 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 DKK4Q9UBT3 224 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 POMT2Q9UKY4 750 aa16.99■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 A0A1W2PNU3 283 aaPredicted RBP16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 TLCD2A6NGC4 264 aa16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ARHGEF33A8MVX0 844 aa16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 C2orf74A8MZ97 194 aa16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 BTN3A1O00481 513 aa16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 ITGA2BP08514 1039 aa16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 POLR2CP19387 275 aaPredicted RBP16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 SLC12A2P55011 1212 aa16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 USP10Q14694 798 aaKnown RBP16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 C16orf72Q14CZ0 275 aa16.98■□□□□ 0.31
COMMD3-BMI1-201ENST00000417470 EFTUD2Q15029 972 aaKnown RBP eCLIP16.98■□□□□ 0.314e-7■■■■□ 23.9
COMMD3-BMI1-201ENST00000417470 CYP2A13Q16696 494 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms