RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 C7orf72A4D263 438 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 SYCE1LA8MT33 242 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 C2CD4DB7Z1M9 353 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 CFAP99D6REC4 459 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 H3BSA7 217 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 K7EQS6 105 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 EIF3FO00303 357 aaPredicted RBP11.34□□□□□ -0.59
RFFL-205ENST00000415395 QSOX1O00391 747 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 WNT9AO14904 365 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 GPR39O43194 453 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 NIPSNAP2O75323 286 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 SUPT7LO94864 414 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 UMPSP11172 480 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 CDK4P11802 303 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 MYF6P23409 242 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 SLC5A2P31639 672 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 SEMG2Q02383 582 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 RPS6KA2Q15349 733 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 ZBED5Q49AG3 693 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 C6orf10Q5SRN2 563 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 ZNF678Q5SXM1 525 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 LCN8Q6JVE9 175 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 LARP4Q71RC2 724 aaKnown RBP eCLIP11.34□□□□□ -0.59
RFFL-205ENST00000415395 NLRP8Q86W28 1048 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 CHPFQ8IZ52 775 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 FAM156AQ8NDB6 213 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 ZNF420Q8TAQ5 688 aaPredicted RBP11.34□□□□□ -0.59
RFFL-205ENST00000415395 STAG3L4Q8TBR4 150 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 TFAP2CQ92754 450 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 COQ10AQ96MF6 247 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 CIB1Q99828 191 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 GABRG3Q99928 467 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 TRIM54Q9BYV2 358 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 UBE2ZQ9H832 354 aaPredicted RBP11.34□□□□□ -0.59
RFFL-205ENST00000415395 NOL11Q9H8H0 719 aaKnown RBP11.34□□□□□ -0.59
RFFL-205ENST00000415395 TMEM45AQ9NWC5 275 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 ACTR3BQ9P1U1 418 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 ABCD2Q9UBJ2 740 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
RFFL-205ENST00000415395 C5orf42Q9H799 3197 aa11.34□□□□□ -0.59
RFFL-205ENST00000415395 ZNF839A8K0R7 811 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 H3BQ06 376 aaPredicted RBP11.33□□□□□ -0.6
RFFL-205ENST00000415395 SPINT1O43278 529 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 SYNCRIPO60506 623 aaKnown RBP11.33□□□□□ -0.6
RFFL-205ENST00000415395 KERAO60938 352 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 AP2A2O94973 939 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 MATN4O95460 622 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 FGF4P08620 206 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 OR56A5P0C7T3 313 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 IDO1P14902 403 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 LBPP18428 481 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 DRD1P21728 446 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 C5AR1P21730 350 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 GRIA3P42263 894 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 SOX9P48436 509 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 RGS4P49798 205 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 GRIK2Q13002 908 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 GK3PQ14409 553 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 TTLL9Q3SXZ7 439 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 LDLRAP1Q5SW96 308 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 SDE2Q6IQ49 451 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 Q6ZVL8 140 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 MMAAQ8IVH4 418 aaKnown RBP11.33□□□□□ -0.6
RFFL-205ENST00000415395 MYO1HQ8N1T3 1032 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 SPATA6LQ8N4H0 392 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 DDHD1Q8NEL9 900 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 PNPT1Q8TCS8 783 aaKnown RBP11.33□□□□□ -0.6
RFFL-205ENST00000415395 GAB3Q8WWW8 586 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 PTERQ96BW5 349 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 MOCOSQ96EN8 888 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 DTD2Q96FN9 168 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 ATOH8Q96SQ7 321 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 ACOX2Q99424 681 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 BOCQ9BWV1 1114 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 PHF7Q9BWX1 381 aaPredicted RBP11.33□□□□□ -0.6
RFFL-205ENST00000415395 ALG9Q9H6U8 611 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 FBRSL1Q9HCM7 1045 aaKnown RBP11.33□□□□□ -0.6
RFFL-205ENST00000415395 ACSS2Q9NR19 701 aa11.33□□□□□ -0.6
RFFL-205ENST00000415395 CHCHD3Q9NX63 227 aaKnown RBP11.33□□□□□ -0.6
RFFL-205ENST00000415395 RNF103-CHMP3A0A140T963 221 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 TRIM64CA6NLI5 447 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 AZIN1O14977 448 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 CRCPO75575 148 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 TSPAN12O95859 305 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 CBSLP0DN79 551 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 KCNA5P22460 613 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 DGKAP23743 735 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 NTSR1P30989 418 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 CA5AP35218 305 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 CBSP35520 551 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 ETV3P41162 512 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 PLOD1Q02809 727 aaPredicted RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 PRKCQQ04759 706 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 DPTQ07507 201 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 ACOX1Q15067 660 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 CST6Q15828 149 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 POM121L1PQ3SYA9 428 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 TMEM196Q5HYL7 178 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 NHSL2Q5HYW2 709 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 GPRC6AQ5T6X5 926 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms