RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 FAM136AQ96C01 138 aa14.22□□□□□ -0.13
LIMS1-206ENST00000414829 TSPAN17Q96FV3 270 aa14.22□□□□□ -0.13
LIMS1-206ENST00000414829 ZPBPQ9BS86 351 aa14.22□□□□□ -0.13
LIMS1-206ENST00000414829 TMEM121BQ9BXQ6 578 aaPredicted RBP14.22□□□□□ -0.13
LIMS1-206ENST00000414829 ASPSCR1Q9BZE9 553 aa14.22□□□□□ -0.13
LIMS1-206ENST00000414829 POPDC3Q9HBV1 291 aa14.22□□□□□ -0.13
LIMS1-206ENST00000414829 LNPEPQ9UIQ6 1025 aa14.22□□□□□ -0.13
LIMS1-206ENST00000414829 POMT2Q9UKY4 750 aa14.22□□□□□ -0.13
LIMS1-206ENST00000414829 PRAMEF33A0A0G2JMD5 474 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 PIPSLA2A3N6 862 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 GSAPA4D1B5 854 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 BRINP1O60477 761 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 TNFSF15O95150 251 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 MATN4O95460 622 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 C8GP07360 202 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 PKLRP30613 574 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 GFERP55789 205 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 IL2P60568 153 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 CFHR1Q03591 330 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 ABRQ12979 859 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 PRKG2Q13237 762 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 KIR2DS3Q14952 304 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 KLHL38Q2WGJ6 581 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 ACSBG2Q5FVE4 666 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 SNAP47Q5SQN1 464 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 HECTD2Q5U5R9 776 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 CACHD1Q5VU97 1274 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 FAM129CQ86XR2 697 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 CTAGE3PQ8IX95 158 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 KDF1Q8NAX2 398 aaPredicted RBP14.21□□□□□ -0.13
LIMS1-206ENST00000414829 FBXO15Q8NCQ5 510 aaPredicted RBP14.21□□□□□ -0.13
LIMS1-206ENST00000414829 ELMO2Q96JJ3 720 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 SLC46A1Q96NT5 459 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 NDNQ99608 321 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 DDA1Q9BW61 102 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 LRRC4CQ9HCJ2 640 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 C1GALT1Q9NS00 363 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 SEMA5BQ9P283 1151 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 PISDQ9UG56 409 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 KLHL3Q9UH77 587 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 VWA7Q9Y334 891 aa14.21□□□□□ -0.13
LIMS1-206ENST00000414829 FAM95CA0A1B0GW59 222 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 C1QTNF9BB2RNN3 333 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 RASGRF2O14827 1237 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 ZBTB14O43829 449 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 PSIP1O75475 530 aaKnown RBP14.2□□□□□ -0.14
LIMS1-206ENST00000414829 C1orf105O95561 183 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 ZBTB11O95625 1053 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-206ENST00000414829 RHOXF2BP0C7M4 288 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 C1QTNF9P0C862 333 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 CYP2A7P20853 494 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 FDXRP22570 491 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 GABRB3P28472 473 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 SPRP35270 261 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-206ENST00000414829 PCBP4P57723 403 aaKnown RBP14.2□□□□□ -0.14
LIMS1-206ENST00000414829 POU4F1Q01851 419 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 ACY1Q03154 408 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 ARHGAP19Q14CB8 494 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 C16orf72Q14CZ0 275 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 TRADDQ15628 312 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 KYNUQ16719 465 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 TMTC4Q5T4D3 741 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 GRTP1Q5TC63 336 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 ANKS6Q68DC2 871 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 FOXR1Q6PIV2 292 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 TAOK1Q7L7X3 1001 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 CCDC91Q7Z6B0 441 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 CLEC14AQ86T13 490 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 BPHLQ86WA6 291 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-206ENST00000414829 MARCH9Q86YJ5 346 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 RCBTB1Q8NDN9 531 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 GIMAP7Q8NHV1 300 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 SNIP1Q8TAD8 396 aaKnown RBP14.2□□□□□ -0.14
LIMS1-206ENST00000414829 KLHL6Q8WZ60 621 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 CYTH2Q99418 400 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 RHOXF2Q9BQY4 288 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 FANCEQ9HB96 536 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 SYTL2Q9HCH5 934 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 INTS7Q9NVH2 962 aaKnown RBP14.2□□□□□ -0.14
LIMS1-206ENST00000414829 TMEM9Q9P0T7 183 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 ICKQ9UPZ9 632 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 MED16Q9Y2X0 877 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 PCDHGA3Q9Y5H0 932 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 ASXL3Q9C0F0 2248 aa14.2□□□□□ -0.14
LIMS1-206ENST00000414829 ZFC3H1O60293 1989 aaKnown RBP14.2□□□□□ -0.14
LIMS1-206ENST00000414829 KNTC1P50748 2209 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 EFCAB7A8K855 629 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 BTN3A1O00481 513 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 SLC16A5O15375 505 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 NVLO15381 856 aaKnown RBP14.19□□□□□ -0.14
LIMS1-206ENST00000414829 CHRM5P08912 532 aaPredicted RBP14.19□□□□□ -0.14
LIMS1-206ENST00000414829 POLR2CP19387 275 aaPredicted RBP14.19□□□□□ -0.14
LIMS1-206ENST00000414829 CDH3P22223 829 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 MCM3P25205 808 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 MPSTP25325 297 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 GPX6P59796 221 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 HSD11B2P80365 405 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 CYP4F3Q08477 520 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 IL11RAQ14626 422 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 TEX35Q5T0J7 233 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms