RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 STK32CQ86UX6 486 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 IQCHQ86VS3 1027 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 PARGQ86W56 976 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 MARCH9Q86YJ5 346 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 MYLK4Q86YV6 388 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 KRTAP1-3Q8IUG1 177 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 CDKL3Q8IVW4 592 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 SLC25A45Q8N413 288 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 RNF10Q8N5U6 811 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 OR2C3Q8N628 320 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 DENND6BQ8NEG7 585 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 IPMKQ8NFU5 416 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 CCDC110Q8TBZ0 833 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 LMX1AQ8TE12 382 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 SAP25Q8TEE9 199 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 C1orf54Q8WWF1 131 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 SCAMP4Q969E2 229 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 MTFMTQ96DP5 389 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 DTD2Q96FN9 168 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 SCRN2Q96FV2 425 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 IMP4Q96G21 291 aaKnown RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 SLC35A4Q96G79 324 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 OXNAD1Q96HP4 312 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 COQ10AQ96MF6 247 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 WDR92Q96MX6 357 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 LENG8Q96PV6 779 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 ALS2CR12Q96Q35 445 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 MCCC1Q96RQ3 725 aaPredicted RBP4.84□□□□□ -1.63
VPS41-205ENST00000414632 AGAP2Q99490 1192 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 APOL2Q9BQE5 337 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 GORASP1Q9BQQ3 440 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 CRB3Q9BUF7 120 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 APOOQ9BUR5 198 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 FICDQ9BVA6 458 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 C1QTNF7Q9BXJ2 289 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 SLC25A51Q9H1U9 297 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 ABCG8Q9H221 673 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 SLC32A1Q9H598 525 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 BPIFA1Q9NP55 256 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 ARFGAP3Q9NP61 516 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 HAUS2Q9NVX0 235 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 LUZP4Q9P127 313 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 AMACRQ9UHK6 382 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 RSPH14Q9UHP6 348 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 CORO2BQ9UQ03 480 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 SHOC2Q9UQ13 582 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 LRCH1Q9Y2L9 728 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 SNX13Q9Y5W8 968 aa4.84□□□□□ -1.63
VPS41-205ENST00000414632 CHD8Q9HCK8 2581 aa4.84□□□□□ -1.64
VPS41-205ENST00000414632 ARHGEF17Q96PE2 2063 aaPredicted RBP4.84□□□□□ -1.64
VPS41-205ENST00000414632 SPTY2D1-AS1A0A0U1RR47 76 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 A0A1W2PQ67 120 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 GOLGA6L9A6NEM1 432 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 HACD1B0YJ81 288 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ANKRD66B4E2M5 251 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 CACNB4O00305 520 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 TRIM38O00635 465 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 CASC3O15234 703 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 FLRT2O43155 660 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PHGDHO43175 533 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 HYAL3O43820 417 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 CEP104O60308 925 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PRAMEF4O60810 478 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 CBFA2T3O75081 653 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 GCATO75600 419 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PIAS2O75928 621 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 AGTP01019 485 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ZNF883P0CG24 379 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 CEACAM1P13688 526 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ETS1P14921 441 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 CSRP1P21291 193 aaKnown RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 CA4P22748 312 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 DGKAP23743 735 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ECHS1P30084 290 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 MC3RP41968 323 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 GRK6P43250 576 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 GPR1P46091 355 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 SLC6A9P48067 706 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 STC1P52823 247 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 WNT3AP56704 352 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 MEF2AQ02078 507 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 CDK18Q07002 472 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 OVGP1Q12889 678 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 TARDBPQ13148 414 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS41-205ENST00000414632 SLC14A1Q13336 389 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 XRCC4Q13426 336 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PTPRCAPQ14761 206 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 NFATC4Q14934 902 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ALG11Q2TAA5 492 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 DEFB133Q30KQ1 61 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 FAM209BQ5JX69 171 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 SIRPB2Q5JXA9 342 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ZNF569Q5MCW4 686 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ANKRD20A2Q5SQ80 823 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ZNF648Q5T619 568 aaPredicted RBP4.83□□□□□ -1.64
VPS41-205ENST00000414632 ANKRD20A1Q5TYW2 823 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 ANKRD20A3Q5VUR7 823 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 PNCKQ6P2M8 343 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 KDELC1Q6UW63 502 aa4.83□□□□□ -1.64
VPS41-205ENST00000414632 MACC1Q6ZN28 852 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms