RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 RGL4Q8IZJ4 473 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 RBFAQ8N0V3 343 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 SLC22A18ASQ8N1D0 253 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 CLDN19Q8N6F1 224 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 RASGEF1AQ8N9B8 481 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 PRSS33Q8NF86 280 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 SCARF2Q96GP6 870 aaPredicted RBP9.75□□□□□ -0.85
DDB1-202ENST00000414411 NDNQ99608 321 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 OLFM1Q99784 485 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 RTKNQ9BST9 563 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 NUF2Q9BZD4 464 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 UNKQ9C0B0 810 aaKnown RBP9.75□□□□□ -0.85
DDB1-202ENST00000414411 MIR1-1HGQ9H1L0 117 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 ATXN10Q9UBB4 475 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 VPS9D1Q9Y2B5 631 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 SLC17A4Q9Y2C5 497 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 CRYL1Q9Y2S2 319 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 TMEM98Q9Y2Y6 226 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 PRSS21Q9Y6M0 314 aa9.75□□□□□ -0.85
DDB1-202ENST00000414411 SPTY2D1-AS1A0A0U1RR47 76 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 GPR89AB7ZAQ6 455 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 C3orf80F5H4A9 247 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 CACNB4O00305 520 aaPredicted RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 PRMT5O14744 637 aaPredicted RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 TNFRSF10CO14798 259 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 LIN7AO14910 233 aaPredicted RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 PFDN6O15212 129 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 SLC22A2O15244 555 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 VEGFDO43915 354 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 FKBP6O75344 327 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 CDK14O94921 469 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 SNUPNO95149 360 aaKnown RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 JUNP05412 331 aaKnown RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 GPR89BP0CG08 455 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 THEGLP0DJG4 465 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 ATP1B2P14415 290 aaPredicted RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 ANPEPP15144 967 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 ZNF7P17097 686 aaPredicted RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 ATP5F1P24539 256 aaPredicted RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 SERPINB5P36952 375 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 PRSS12P56730 875 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 DNAJB13P59910 316 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 AP2B1P63010 937 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 BLMHQ13867 455 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 CSHL1Q14406 222 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 FAM83EQ2M2I3 478 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 TECRLQ5HYJ1 363 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 MACC1Q6ZN28 852 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 ACAD11Q709F0 780 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 DCP2Q8IU60 420 aaKnown RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 ZNF547Q8IVP9 402 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 DEFB107AQ8IZN7 70 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 KIRREL3Q8IZU9 778 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 CCNYL1Q8N7R7 359 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 NAT14Q8WUY8 206 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 SGF29Q96ES7 293 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 TSPAN17Q96FV3 270 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 KLHDC7BQ96G42 594 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 CCDC28BQ9BUN5 200 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 OR2AG1Q9H205 316 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 ZNF385DQ9H6B1 395 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 AASDHPPTQ9NRN7 309 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 NCKIPSDQ9NZQ3 722 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 PNMA8BQ9ULN7 279 aaPredicted RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 CDYLQ9Y232 598 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 MED16Q9Y2X0 877 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 R4GN57 208 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 OTOGLQ3ZCN5 2332 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 CFAP99D6REC4 459 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 TLR4O00206 839 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 VILLO15195 856 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 NUAK1O60285 661 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 PDE5AO76074 875 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 AP2A2O94973 939 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 ESR1P03372 595 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 ZNF8P17098 575 aaPredicted RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 MSH3P20585 1137 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 PIK3R1P27986 724 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 FMO4P31512 558 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 CSNK1EP49674 416 aaKnown RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 ERFP50548 548 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 AFF3P51826 1226 aaKnown RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 CTSCP53634 463 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 TIAL1Q01085 375 aaKnown RBP eCLIP9.74□□□□□ -0.85
DDB1-202ENST00000414411 TBL3Q12788 808 aaKnown RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 FZD2Q14332 565 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 ZRSR2Q15696 482 aaKnown RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 CTSL3PQ5NE16 218 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 AGAP9Q5VTM2 703 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 AAGABQ6PD74 315 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 SYT12Q8IV01 421 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 CPSF7Q8N684 471 aaKnown RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 PPFIBP2Q8ND30 876 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 JADE3Q92613 823 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 DCUN1D1Q96GG9 259 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 LOXL4Q96JB6 756 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 PPP1R36Q96LQ0 422 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 BRINP2Q9C0B6 783 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 CLPBQ9H078 707 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 FGF22Q9HCT0 170 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms