RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 GALNT7Q86SF2 657 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 ANKMY2Q8IV38 441 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 CEP112Q8N8E3 955 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 CDKL2Q92772 493 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 INPP5DQ92835 1189 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 MAP3K3Q99759 626 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 PHACTR1Q9C0D0 580 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 FANCEQ9HB96 536 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 SYTL2Q9HCH5 934 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 FAM114A2Q9NRY5 505 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 SOHLH2Q9NX45 425 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 TAS2R13Q9NYV9 303 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 ZFATQ9P243 1243 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 LNPEPQ9UIQ6 1025 aa14.28□□□□□ -0.12
CHD1-202ENST00000414220 CORO1CQ9ULV4 474 aaPredicted RBP14.28□□□□□ -0.12
CHD1-202ENST00000414220 PMS2P1A4D2B8 440 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 C9orf172C9J069 976 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 E7ESA3 106 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 KIF1CO43896 1103 aaKnown RBP14.27□□□□□ -0.13
CHD1-202ENST00000414220 HAUS5O94927 633 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 CBSLP0DN79 551 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 MAP4P27816 1152 aaKnown RBP14.27□□□□□ -0.13
CHD1-202ENST00000414220 CBSP35520 551 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 RGS4P49798 205 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 RAB28P51157 221 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 MGAT5Q09328 741 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 CBLBQ13191 982 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 STEAP4Q687X5 459 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 NEK10Q6ZWH5 1172 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 VRK3Q8IV63 474 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 CNTN4Q8IWV2 1026 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 HNRNPLLQ8WVV9 542 aaKnown RBP14.27□□□□□ -0.13
CHD1-202ENST00000414220 FAM136AQ96C01 138 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 PWWP2AQ96N64 755 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 OR6C1Q96RD1 312 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 AARSD1Q9BTE6 412 aaKnown RBP14.27□□□□□ -0.13
CHD1-202ENST00000414220 XKR8Q9H6D3 395 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 SAYSD1Q9NPB0 183 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 ACTR10Q9NZ32 417 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 SEMA5BQ9P283 1151 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 TXNDC16Q9P2K2 825 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 TRMT6Q9UJA5 497 aaKnown RBP14.27□□□□□ -0.13
CHD1-202ENST00000414220 POMT2Q9UKY4 750 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 RARRES3Q9UL19 164 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 CDYLQ9Y232 598 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 DHRS7Q9Y394 339 aa14.27□□□□□ -0.13
CHD1-202ENST00000414220 SPEGQ15772 3267 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 PABPN1LA6NDY0 278 aaKnown RBP14.26□□□□□ -0.13
CHD1-202ENST00000414220 ZNF839A8K0R7 811 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 ISM1B1AKI9 464 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 EIF3FO00303 357 aaPredicted RBP14.26□□□□□ -0.13
CHD1-202ENST00000414220 BTN3A3O00478 584 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 BTN3A1O00481 513 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 CATP04040 527 aaKnown RBP14.26□□□□□ -0.13
CHD1-202ENST00000414220 GSTA2P09210 222 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 PRDX3P30048 256 aaKnown RBP14.26□□□□□ -0.13
CHD1-202ENST00000414220 MPP1Q00013 466 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 KIR2DS3Q14952 304 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 KYNUQ16719 465 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 GLE1Q53GS7 698 aaKnown RBP14.26□□□□□ -0.13
CHD1-202ENST00000414220 ZNF789Q5FWF6 425 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 TEDDM1Q5T9Z0 273 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 ANKS6Q68DC2 871 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 CNSTQ6PJW8 725 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 PPP1R3BQ86XI6 285 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 RASGRP3Q8IV61 690 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 IGDCC3Q8IVU1 814 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 SPACA3Q8IXA5 215 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 BMPERQ8N8U9 685 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 N4BP2L2Q92802 583 aaPredicted RBP14.26□□□□□ -0.13
CHD1-202ENST00000414220 SLC41A2Q96JW4 573 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 FCRL4Q96PJ5 515 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 FAM129AQ9BZQ8 928 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 TSPYL1Q9H0U9 437 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 INTS7Q9NVH2 962 aaKnown RBP14.26□□□□□ -0.13
CHD1-202ENST00000414220 MTRF1LQ9UGC7 380 aaKnown RBP14.26□□□□□ -0.13
CHD1-202ENST00000414220 ICKQ9UPZ9 632 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 B3GALT1Q9Y5Z6 326 aa14.26□□□□□ -0.13
CHD1-202ENST00000414220 BPTFQ12830 3046 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 COL27A1Q8IZC6 1860 aaPredicted RBP14.25□□□□□ -0.13
CHD1-202ENST00000414220 IGHV5-51A0A0C4DH38 117 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.25□□□□□ -0.13
CHD1-202ENST00000414220 RASGRF2O14827 1237 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 ZBTB14O43829 449 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 MT-ND3P03897 115 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 CHRM5P08912 532 aaPredicted RBP14.25□□□□□ -0.13
CHD1-202ENST00000414220 MPC1LP0DKB6 136 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 HSD17B2P37059 387 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 CLCN7P51798 805 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 KPNA2P52292 529 aaKnown RBP14.25□□□□□ -0.13
CHD1-202ENST00000414220 TMPRSS3P57727 454 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 PDAP1Q13442 181 aaKnown RBP14.25□□□□□ -0.13
CHD1-202ENST00000414220 TUBB3Q13509 450 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 KLHL38Q2WGJ6 581 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 MANEAQ5SRI9 462 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 FAM45BPQ6NSW5 357 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 SLC26A11Q86WA9 606 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 CCDC25Q86WR0 208 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 ADGRF3Q8IZF5 1079 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms