RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 SPNS2Q8IVW8 549 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 NAT8LQ8N9F0 302 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 SLC38A9Q8NBW4 561 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 FLVCR1-AS1Q8TAF5 88 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 CT55Q8WUE5 264 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 LPGAT1Q92604 370 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 ZNF669Q96BR6 464 aaPredicted RBP25.47■■□□□ 1.67
VEGFA-207ENST00000413642 FAM136AQ96C01 138 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 BIRC8Q96P09 236 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 FCRL4Q96PJ5 515 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 OR2A14Q96R47 310 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 DDX47Q9H0S4 455 aaKnown RBP25.47■■□□□ 1.67
VEGFA-207ENST00000413642 LHX9Q9NQ69 397 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 GNPTGQ9UJJ9 305 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 PADI1Q9ULC6 663 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 SDR42E2A6NKP2 422 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 CES2O00748 559 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 KATNA1O75449 491 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 SCRG1O75711 98 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 SLCO2B1O94956 709 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 MLNP12872 115 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 PEBP1P30086 187 aaKnown RBP25.46■■□□□ 1.67
VEGFA-207ENST00000413642 FNTAP49354 379 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 CDC20Q12834 499 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 GRB7Q14451 532 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 TYSND1Q2T9J0 566 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 ANKRD20A4Q4UJ75 823 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 DNAJC21Q5F1R6 531 aaKnown RBP25.46■■□□□ 1.67
VEGFA-207ENST00000413642 ZNF789Q5FWF6 425 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 MRNIPQ6NTE8 343 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 SPESP1Q6UW49 350 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 SDCCAG8Q86SQ7 713 aaPredicted RBP25.46■■□□□ 1.67
VEGFA-207ENST00000413642 TMEM126BQ8IUX1 230 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 C2orf73Q8N5S3 287 aaPredicted RBP25.46■■□□□ 1.67
VEGFA-207ENST00000413642 OR1L3Q8NH93 324 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 IL17FQ96PD4 163 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 EFHD1Q9BUP0 239 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 RUVBL2Q9Y230 463 aaKnown RBP25.46■■□□□ 1.67
VEGFA-207ENST00000413642 CRYL1Q9Y2S2 319 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 ATRXP46100 2492 aa25.46■■□□□ 1.67
VEGFA-207ENST00000413642 GOLGA6L10A0A0M3HER8 536 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 NIPSNAP2O75323 286 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 CCNYL3P0C7X3 344 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 TMED2Q15363 201 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 ZIC1Q15915 447 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 NEPROQ6NW34 567 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 CDHR3Q6ZTQ4 885 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 CENPUQ71F23 418 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 LRRC6Q86X45 466 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 FAM20CQ8IXL6 584 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 CAPZA3Q96KX2 299 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 XAB2Q9HCS7 855 aaKnown RBP25.45■■□□□ 1.66
VEGFA-207ENST00000413642 FAM60AQ9NP50 221 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 SAMD15Q9P1V8 674 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 GALPQ9UBC7 116 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 TSR3Q9UJK0 312 aaKnown RBP25.45■■□□□ 1.66
VEGFA-207ENST00000413642 NFS1Q9Y697 457 aa25.45■■□□□ 1.66
VEGFA-207ENST00000413642 TMEM150CB9EJG8 249 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 HCRTR1O43613 425 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 TCN2P20062 427 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 GNG11P61952 73 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 GPS2Q13227 327 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 DNASE1L3Q13609 305 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 DHX34Q14147 1143 aaKnown RBP25.44■■□□□ 1.66
VEGFA-207ENST00000413642 BORAQ6PGQ7 559 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 GRK7Q8WTQ7 553 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 ANP32BQ92688 251 aaKnown RBP25.44■■□□□ 1.66
VEGFA-207ENST00000413642 PANX3Q96QZ0 392 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 MENTQ9BUN1 341 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 TWSG1Q9GZX9 223 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 OR6C2Q9NZP2 312 aa25.44■■□□□ 1.66
VEGFA-207ENST00000413642 ZCWPW2A0A1B0GU75 182 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 FAM237BA0A1B0GVD1 139 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 KRT87PA6NCN2 255 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 ISM1B1AKI9 464 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 MT-ND3P03897 115 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 PKLRP30613 574 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 MAGEA3P43357 314 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 PPP1R7Q15435 360 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 KYNUQ16719 465 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 DEFB109BQ30KR1 87 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 CCSMST1Q4G0I0 132 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 RNASEH2BQ5TBB1 312 aaKnown RBP25.43■■□□□ 1.66
VEGFA-207ENST00000413642 LCN10Q6JVE6 187 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 LINC01555Q8NAE3 123 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 SIGLEC10Q96LC7 697 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 KLHL20Q9Y2M5 609 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 MAD1L1Q9Y6D9 718 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 PIKFYVEQ9Y2I7 2098 aa25.43■■□□□ 1.66
VEGFA-207ENST00000413642 SMG1Q96Q15 3661 aaKnown RBP25.42■■□□□ 1.66
VEGFA-207ENST00000413642 CPNE3O75131 537 aaKnown RBP25.42■■□□□ 1.66
VEGFA-207ENST00000413642 FURINP09958 794 aa25.42■■□□□ 1.66
VEGFA-207ENST00000413642 TCP1P17987 556 aaKnown RBP25.42■■□□□ 1.66
VEGFA-207ENST00000413642 PAMP19021 973 aa25.42■■□□□ 1.66
VEGFA-207ENST00000413642 OGNP20774 298 aaKnown RBP25.42■■□□□ 1.66
VEGFA-207ENST00000413642 PTGIRP43119 386 aa25.42■■□□□ 1.66
VEGFA-207ENST00000413642 BDKRB1P46663 353 aa25.42■■□□□ 1.66
VEGFA-207ENST00000413642 ERV3-1Q14264 604 aa25.42■■□□□ 1.66
VEGFA-207ENST00000413642 DEFB110Q30KQ9 67 aa25.42■■□□□ 1.66
VEGFA-207ENST00000413642 UNC5DQ6UXZ4 953 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms