RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CDKN1CP49918 316 aaPredicted RBP11.73□□□□□ -0.53
LIMS2-210ENST00000413578 HADHBP55084 474 aaKnown RBP11.73□□□□□ -0.53
LIMS2-210ENST00000413578 TPM4P67936 248 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 PRKG2Q13237 762 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 DEFB110Q30KQ9 67 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 NKAIN1Q4KMZ8 207 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ODF2Q5BJF6 829 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 C1orf189Q5VU69 101 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 UNC5AQ6ZN44 842 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 BBS12Q6ZW61 710 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 KCNMB4Q86W47 210 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 KATNAL2Q8IYT4 538 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 SLC34A3Q8N130 599 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ZADH2Q8N4Q0 377 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 DNAJC22Q8N4W6 341 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 PPP4R1Q8TF05 950 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 PTERQ96BW5 349 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 WDR77Q9BQA1 342 aaPredicted RBP11.73□□□□□ -0.53
LIMS2-210ENST00000413578 AP1M1Q9BXS5 423 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 DEF6Q9H4E7 631 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 FAM96AQ9H5X1 160 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 C10orf88Q9H8K7 445 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ARNT2Q9HBZ2 717 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 SPHK1Q9NYA1 384 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 IFT80Q9P2H3 777 aaPredicted RBP11.73□□□□□ -0.53
LIMS2-210ENST00000413578 DHCR7Q9UBM7 475 aaKnown RBP11.73□□□□□ -0.53
LIMS2-210ENST00000413578 INTUQ9ULD6 942 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 SRPK3Q9UPE1 567 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ALG6Q9Y672 507 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 PIKFYVEQ9Y2I7 2098 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 APOC4-APOC2K7ER74 178 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 AGPSO00116 658 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 CCL22O00626 93 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 SPOPO43791 374 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 CRTAMO95727 393 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 APOC2P02655 101 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 GSTM1P09488 218 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 PRSS56P0CW18 603 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 PRF1P14222 555 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 POU3F2P20265 443 aaPredicted RBP11.72□□□□□ -0.53
LIMS2-210ENST00000413578 PEBP1P30086 187 aaKnown RBP11.72□□□□□ -0.53
LIMS2-210ENST00000413578 TSFMP43897 325 aaKnown RBP11.72□□□□□ -0.53
LIMS2-210ENST00000413578 GSTM4Q03013 218 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 ELOAQ14241 798 aaKnown RBP11.72□□□□□ -0.53
LIMS2-210ENST00000413578 GPR33Q49SQ1 333 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 ITPRIPL1Q6GPH6 555 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 TLDC1Q6P9B6 456 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 SERPINA9Q86WD7 417 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 CLDN19Q8N6F1 224 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 OR5AR1Q8NGP9 310 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 GOLPH3Q9H4A6 298 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 NHEJ1Q9H9Q4 299 aaPredicted RBP11.72□□□□□ -0.53
LIMS2-210ENST00000413578 ATP13A2Q9NQ11 1180 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 ENAMQ9NRM1 1142 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 ABHD10Q9NUJ1 306 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 NOVA2Q9UNW9 492 aaKnown RBP11.72□□□□□ -0.53
LIMS2-210ENST00000413578 ENTPD4Q9Y227 616 aa11.72□□□□□ -0.53
LIMS2-210ENST00000413578 APCP25054 2843 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 AKAP9Q99996 3911 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 A0A0J9YY10 115 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 SYCE3A1L190 88 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 LRRTM2O43300 516 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 ZRANB2O95218 330 aaKnown RBP eCLIP11.71□□□□□ -0.53
LIMS2-210ENST00000413578 CHRM5P08912 532 aaPredicted RBP11.71□□□□□ -0.53
LIMS2-210ENST00000413578 MMP11P24347 488 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 PSMA3P25788 255 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 PSMB4P28070 264 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 MC4RP32245 332 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 SHMT2P34897 504 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 GLRBP48167 497 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 TMPRSS15P98073 1019 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 AIMP2Q13155 320 aaKnown RBP11.71□□□□□ -0.53
LIMS2-210ENST00000413578 TRIM14Q14142 442 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 SLC9A5Q14940 896 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 ZRSR2Q15696 482 aaKnown RBP11.71□□□□□ -0.53
LIMS2-210ENST00000413578 CYP2A13Q16696 494 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 SLC5A12Q1EHB4 618 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 ANKRD20A2Q5SQ80 823 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 ANKRD20A1Q5TYW2 823 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 ANKRD20A3Q5VUR7 823 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 PIANPQ8IYJ0 282 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 ZNF655Q8N720 491 aaPredicted RBP11.71□□□□□ -0.53
LIMS2-210ENST00000413578 FKBP10Q96AY3 582 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 DNAJC1Q96KC8 554 aaKnown RBP11.71□□□□□ -0.53
LIMS2-210ENST00000413578 SPSB2Q99619 263 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 VPS37BQ9H9H4 285 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 SLC6A20Q9NP91 592 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 AGPAT4Q9NRZ5 378 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 OR6C2Q9NZP2 312 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 NDOR1Q9UHB4 597 aa11.71□□□□□ -0.53
LIMS2-210ENST00000413578 GPN3Q9UHW5 284 aaPredicted RBP11.71□□□□□ -0.53
LIMS2-210ENST00000413578 AAR2Q9Y312 384 aaKnown RBP11.71□□□□□ -0.53
LIMS2-210ENST00000413578 CROCCQ5TZA2 2017 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 SLC5A10A0PJK1 596 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 BHMG1C9JSJ3 638 aaPredicted RBP11.7□□□□□ -0.54
LIMS2-210ENST00000413578 SOCS6O14544 535 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 LIN7AO14910 233 aaPredicted RBP11.7□□□□□ -0.54
LIMS2-210ENST00000413578 MFAP3LO75121 409 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 AP2A2O94973 939 aa11.7□□□□□ -0.54
LIMS2-210ENST00000413578 ITGA3P26006 1051 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms