RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 KMT5CQ86Y97 462 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 CREBRFQ8IUR6 639 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 PELI3Q8N2H9 469 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 NAT8LQ8N9F0 302 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 UXS1Q8NBZ7 420 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 C9orf43Q8TAL5 461 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 RNF128Q8TEB7 428 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 KRT35Q92764 455 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 LINGO1Q96FE5 620 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 THOC1Q96FV9 657 aaKnown RBP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 SPATA33Q96N06 139 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 NTPCRQ9BSD7 190 aaKnown RBP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 TRAF4Q9BUZ4 470 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 UBTD1Q9HAC8 227 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 CDH20Q9HBT6 801 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 LRRC4Q9HBW1 653 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 PTTG2Q9NZH5 202 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 B3GAT1Q9P2W7 334 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 WNT16Q9UBV4 365 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 RALYQ9UKM9 306 aaKnown RBP4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 LIPT1Q9Y234 373 aa4.54□□□□□ -1.68
HMGB3P31-201ENST00000413333 TEX13DA0A0J9YY54 714 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 LRRD1A4D1F6 860 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 OOEPA6NGQ2 149 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 PGLSO95336 258 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 CSN3P07498 182 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 SAGP10523 405 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 GM2AP17900 193 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 LBPP18428 481 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 JAK1P23458 1154 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 MLLT10P55197 1068 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 EEF1A1P68104 462 aaKnown RBP4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 TUBA1BP68363 451 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 DMPKQ09013 629 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 AP1B1Q10567 949 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 CUL3Q13618 768 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF260Q3ZCT1 412 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 ASPRV1Q53RT3 343 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 SYT14P1Q58G82 188 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 EEF1A1P5Q5VTE0 462 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF449Q6P9G9 518 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 PACS1Q6VY07 963 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 LONP2Q86WA8 852 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 L3MBTL4Q8NA19 623 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 THAP8Q8NA92 274 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 PPFIBP2Q8ND30 876 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 VANGL1Q8TAA9 524 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 FIG4Q92562 907 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 MIB2Q96AX9 1013 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 ADGRG7Q96K78 797 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 HNRNPABQ99729 332 aaKnown RBP4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 C1QTNF7Q9BXJ2 289 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 KLHL1Q9NR64 748 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 SERINC1Q9NRX5 453 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 ADPRHL2Q9NX46 363 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 POU2F3Q9UKI9 436 aa4.53□□□□□ -1.68
HMGB3P31-201ENST00000413333 COL3A1P02461 1466 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 A0A0G2JNG1 304 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 C5orf60A6NFR6 353 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 SLC33A1O00400 549 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 LUC7L3O95232 432 aaKnown RBP4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 FCGR1AP12314 374 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 CDH1P12830 882 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 HLA-DOBP13765 273 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 MYL6BP14649 208 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 AHRP35869 848 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 HSD17B3P37058 310 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 RPS18P62269 152 aaKnown RBP4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 DLK1P80370 383 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 TNK1Q13470 666 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 KIR2DS5Q14953 304 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 DUOXA1Q1HG43 343 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 TWISTNBQ3B726 338 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 MCMDC2Q4G0Z9 681 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 ELFN2Q5R3F8 820 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 STXBP5Q5T5C0 1151 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 C11orf63Q6NUN7 778 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 CASC4Q6P4E1 433 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 NRARPQ7Z6K4 114 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 FOXP4Q8IVH2 680 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 CPSF7Q8N684 471 aaKnown RBP4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 RBMXL3Q8N7X1 1067 aaKnown RBP4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 KCNH5Q8NCM2 988 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 OR13J1Q8NGT2 312 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 RAD54LQ92698 747 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 SNX21Q969T3 373 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 TEKT1Q969V4 418 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 CABS1Q96KC9 395 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 ZNF385AQ96PM9 386 aaKnown RBP4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 RAD9AQ99638 391 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 SLC2A11Q9BYW1 496 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 VN1R1Q9GZP7 353 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 SLC5A7Q9GZV3 580 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 IL25Q9H293 177 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 SNX25Q9H3E2 840 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 DNAJC4Q9NNZ3 241 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 TXNDC16Q9P2K2 825 aa4.52□□□□□ -1.69
HMGB3P31-201ENST00000413333 TMED3Q9Y3Q3 217 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms