RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 ISG20Q96AZ6 181 aaKnown RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 TMEM169Q96HH4 297 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 HMX1Q9NP08 348 aaPredicted RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 SLC6A13Q9NSD5 602 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 ARNTLO00327 626 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 SLC28A1O00337 649 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 FZD6O60353 706 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 NPPAP01160 153 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 HNRNPCP07910 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
NUB1-201ENST00000413040 COL6A1P12109 1028 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 ITPKAP23677 461 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 EMP3P54852 163 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 ADARB1P78563 741 aaKnown RBP13.53□□□□□ -0.24
NUB1-201ENST00000413040 LDLRAP1Q5SW96 308 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 THAP5Q7Z6K1 395 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 PDPRQ8NCN5 879 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 EGLN2Q96KS0 407 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 APOLD1Q96LR9 279 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 HPS4Q9NQG7 708 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 SLC25A37Q9NYZ2 338 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 DLGAP4Q9Y2H0 992 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 OARD1Q9Y530 152 aa13.53□□□□□ -0.24
NUB1-201ENST00000413040 MANBAO00462 879 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 HOXA2O43364 376 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 DIRAS1O95057 198 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 GLUD1P00367 558 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 SERPINA1P01009 418 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 KRT6AP02538 564 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 KRT6BP04259 564 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 BCKDHAP12694 445 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 CYP4B1P13584 511 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 MATN1P21941 496 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 JAK1P23458 1154 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 ACRV1P26436 265 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 KRT6CP48668 564 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 AP1S1P61966 158 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 KCNAB2Q13303 367 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 SPATS1Q496A3 300 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 GPR26Q8NDV2 337 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 FRS2Q8WU20 508 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 CWH43Q9H720 699 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 C1orf109Q9NX04 203 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 PCDHGA8Q9Y5G5 932 aa13.52□□□□□ -0.24
NUB1-201ENST00000413040 CHD5Q8TDI0 1954 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 UPK1AO00322 258 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 WDR47O94967 919 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 ALPLP05186 524 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 TACR1P25103 407 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 SPAM1P38567 509 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 HALP42357 657 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 HLCSP50747 726 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 MAD2L1Q13257 205 aaPredicted RBP13.52□□□□□ -0.25
NUB1-201ENST00000413040 BROXQ5VW32 411 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 RIMKLAQ8IXN7 391 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 PNPT1Q8TCS8 783 aaKnown RBP13.52□□□□□ -0.25
NUB1-201ENST00000413040 NRBF2Q96F24 287 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 INPP5KQ9BT40 448 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 VN1R3Q9BXE9 311 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 EBPLQ9BY08 206 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 AASSQ9UDR5 926 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 PCDHB14Q9Y5E9 798 aa13.52□□□□□ -0.25
NUB1-201ENST00000413040 NPIPB15A6NHN6 443 aaPredicted RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 GAPDHSO14556 408 aaPredicted RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 ZBTB11O95625 1053 aaPredicted RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 HIST1H2AGP0C0S8 130 aaPredicted RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 MSH3P20585 1137 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 HIST1H2ADP20671 130 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 AGXTP21549 392 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 GABRR2P28476 465 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 PIGAP37287 484 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 RPS14P62263 151 aaKnown RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 TSTA3Q13630 321 aaPredicted RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 UBE2R2Q712K3 238 aaPredicted RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 ZC3H7AQ8IWR0 971 aaKnown RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 HS6ST3Q8IZP7 471 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 DCAF4L2Q8NA75 395 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 ZNF548Q8NEK5 533 aaPredicted RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 SLC22A17Q8WUG5 538 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 PDLIM5Q96HC4 596 aaKnown RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 IGSF21Q96ID5 467 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 HIST1H2AHQ96KK5 128 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 HIST1H2AJQ99878 128 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 H2AFJQ9BTM1 129 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 SMG9Q9H0W8 520 aaKnown RBP13.51□□□□□ -0.25
NUB1-201ENST00000413040 ATP13A3Q9H7F0 1226 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 PLGRKTQ9HBL7 147 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 C8orf4Q9NR00 106 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 J3QRK9 145 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 CLDN9O95484 217 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 PDYNP01213 254 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 IL5RAQ01344 420 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 TTC23Q5W5X9 447 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 C16orf87Q6PH81 154 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 ZSWIM9Q86XI8 627 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 NXPE1Q8N323 547 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 C10orf111Q8N326 155 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 OR8J3Q8NGG0 315 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 MYLIPQ8WY64 445 aa13.51□□□□□ -0.25
NUB1-201ENST00000413040 FBXL8Q96CD0 374 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms