RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 PRAMEF1O95521 474 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 DGKAP23743 735 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 HSPA14Q0VDF9 509 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 IL18Q14116 193 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 NPTX1Q15818 432 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 DDI2Q5TDH0 399 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 LIPMQ5VYY2 423 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 KIAA1324Q6UXG2 1013 aaKnown RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CFAP77Q6ZQR2 320 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 R3HCC1LQ7Z5L2 792 aaKnown RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 KCTD20Q7Z5Y7 419 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 SYVN1Q86TM6 617 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 GPSM1Q86YR5 675 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CHPFQ8IZ52 775 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 OR13J1Q8NGT2 312 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 KLHL5Q96PQ7 755 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 EBNA1BP2Q99848 306 aaKnown RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MFSD1Q9H3U5 465 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 BCAS3Q9H6U6 928 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PAK6Q9NQU5 681 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MORF4L1Q9UBU8 362 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 COQ4Q9Y3A0 265 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ARVCFO00192 962 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PRMT3O60678 531 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MTHFRP42898 656 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 FLI1Q01543 452 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 REP15Q6BDI9 236 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 AHSA2Q719I0 299 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MILR1Q7Z6M3 343 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 TMEM17Q86X19 198 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 LURAP1Q96LR2 239 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ZSWIM3Q96MP5 696 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ITPAQ9BY32 194 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 FAM126AQ9BYI3 521 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 DPEP3Q9H4B8 488 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ARL15Q9NXU5 204 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 KIAA1522Q9P206 1035 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 LEF1Q9UJU2 399 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CDH7Q9ULB5 785 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ZNF451Q9Y4E5 1061 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 A0A087X1B8 175 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 SOCS7O14512 581 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 ACOX3O15254 700 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 INMTO95050 263 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 ADH1CP00326 375 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 PIGRP01833 764 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 FTH1P02794 183 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 LPOP22079 712 aaPredicted RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 PSMA1P25786 263 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 CORO1AP31146 461 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 PRKAR1BP31321 381 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 JAM2P57087 298 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 DCDC1P59894 354 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 RPL6Q02878 288 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 STX4Q12846 297 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 NOMO1Q15155 1222 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 DCAF12L1Q5VU92 463 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 LINC00299Q6ZSB3 139 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 MTSS1LQ765P7 747 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 PIWIL4Q7Z3Z4 852 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 FGD2Q7Z6J4 655 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 ANKK1Q8NFD2 765 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 DNAJB14Q8TBM8 379 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 PRR11Q96HE9 360 aaPredicted RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 ZNF597Q96LX8 424 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 HOXD1Q9GZZ0 328 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 ZNF334Q9HCZ1 680 aaPredicted RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 MIEF1Q9NQG6 463 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 MCUBQ9NWR8 336 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 B3GNT2Q9NY97 397 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 RIMKLBQ9ULI2 386 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 OR14I1A6ND48 311 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 CPSF4O95639 269 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 FGF1P05230 155 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 STOMP27105 288 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 RFX3P48380 749 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 TTPAP49638 278 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 CLCN5P51795 746 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 PTPRNQ16849 979 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 STXBP5Q5T5C0 1151 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 RNASEH2BQ5TBB1 312 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 NKAPQ8N5F7 415 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 OR5J2Q8NH18 312 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 RIT1Q92963 219 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 CNDP2Q96KP4 475 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 RIPOR3Q96MK2 946 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 DPY30Q9C005 99 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 REEP1Q9H902 201 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 UFSP2Q9NUQ7 469 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 OPTCQ9UBM4 332 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 U3KQV3 271 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 AHDC1Q5TGY3 1603 aaPredicted RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 HOXC11O43248 304 aaPredicted RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 MLNP12872 115 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 DDCP20711 480 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 CHI3L1P36222 383 aaPredicted RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 IDH2P48735 452 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 RORCP51449 518 aa8.36□□□□□ -1.07
PBRM1-209ENST00000412587 PSMD4P55036 377 aaKnown RBP8.36□□□□□ -1.07
PBRM1-209ENST00000412587 CDKL1Q00532 357 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms