RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 PTCHD3Q3KNS1 767 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 CCDC14Q49A88 953 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 PRAMEF17Q5VTA0 474 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 FCRL6Q6DN72 434 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 SMYD5Q6GMV2 418 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 PLEKHA7Q6IQ23 1121 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 TMEM207Q6UWW9 146 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 GFRALQ6UXV0 394 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 SPOCD1Q6ZMY3 1216 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 USP45Q70EL2 814 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 PIGWQ7Z7B1 504 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 PHF13Q86YI8 300 aaPredicted RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 TGIF2LYQ8IUE0 185 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 RELL1Q8IUW5 271 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 DSELQ8IZU8 1212 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 BCORP1Q8N888 145 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 CCDC89Q8N998 374 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 OR8K5Q8NH50 307 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 UHMK1Q8TAS1 419 aaKnown RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 CCHCR1Q8TD31 782 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 PPP4R1Q8TF05 950 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 RXFP2Q8WXD0 754 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 ATG4AQ8WYN0 398 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 MTFMTQ96DP5 389 aaKnown RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 SCRN2Q96FV2 425 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 COX14Q96I36 57 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 RBM41Q96IZ5 413 aaKnown RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 MAGEB10Q96LZ2 347 aaPredicted RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 NSMCE3Q96MG7 304 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 LRFN5Q96NI6 719 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 AGAP3Q96P47 875 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 IP6K3Q96PC2 410 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 GBP5Q96PP8 586 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 MDFIQ99750 246 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 MAP3K3Q99759 626 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 RIOK2Q9BVS4 552 aaKnown RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 CATSPERBQ9H7T0 1116 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 RMI1Q9H9A7 625 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 MRPL47Q9HD33 250 aaKnown RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 METTL5Q9NRN9 209 aaKnown RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 SEMA3GQ9NS98 782 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 KLC4Q9NSK0 619 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 HAUS2Q9NVX0 235 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 NINJ2Q9NZG7 142 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 ZNF624Q9P2J8 865 aaPredicted RBP6.75□□□□□ -1.33
LSM8-202ENST00000411938 SLC12A4Q9UP95 1085 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 PADI2Q9Y2J8 665 aa6.75□□□□□ -1.33
LSM8-202ENST00000411938 UBA6A0AVT1 1052 aaPredicted RBP6.74□□□□□ -1.33
LSM8-202ENST00000411938 TMEM120BA0PK00 339 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 CFAP73A6NFT4 308 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 ARHGAP42A6NI28 874 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 PCDH17O14917 1159 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 CHUKO15111 745 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 TP73O15350 636 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 HTRA2O43464 458 aaPredicted RBP6.74□□□□□ -1.33
LSM8-202ENST00000411938 LSM8O95777 96 aaKnown RBP6.74□□□□□ -1.33
LSM8-202ENST00000411938 TTC4O95801 387 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 KRT1P04264 644 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 CALB1P05937 261 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 CAPN1P07384 714 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 VIMP08670 466 aaKnown RBP6.74□□□□□ -1.33
LSM8-202ENST00000411938 ATXN8OSP0DMR3 200 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 IVDP26440 423 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 CETN2P41208 172 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 ARCN1P48444 511 aaKnown RBP6.74□□□□□ -1.33
LSM8-202ENST00000411938 PAPOLAP51003 745 aaKnown RBP6.74□□□□□ -1.33
LSM8-202ENST00000411938 RENBPP51606 427 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 MNAT1P51948 309 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 SMSP52788 366 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 TAS2R40P59535 323 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 Q0VFX4 171 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 SNX1Q13596 522 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 TLR1Q15399 786 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 CCNG2Q16589 344 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 TMTC4Q5T4D3 741 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 B3GNTL1Q67FW5 361 aaPredicted RBP6.74□□□□□ -1.33
LSM8-202ENST00000411938 LRRC66Q68CR7 880 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 KLHL35Q6PF15 583 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 FAM198BQ6UWH4 519 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 ARCQ7LC44 396 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 EXOC3L1Q86VI1 746 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 KMT5CQ86Y97 462 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 SYTL1Q8IYJ3 562 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 CHDHQ8NE62 594 aaPredicted RBP6.74□□□□□ -1.33
LSM8-202ENST00000411938 DYDC1Q8WWB3 177 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 SPOCK2Q92563 424 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 ZNF501Q96CX3 271 aaPredicted RBP6.74□□□□□ -1.33
LSM8-202ENST00000411938 CXorf40BQ96DE9 158 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 PLCD4Q9BRC7 762 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 OSBPL8Q9BZF1 889 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 TRIM7Q9C029 511 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 SLC39A8Q9C0K1 460 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 SLC7A5P2Q9GIP4 190 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 RAB33BQ9H082 229 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 YY1AP1Q9H869 796 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 SP110Q9HB58 689 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 ATP13A2Q9NQ11 1180 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 POT1Q9NUX5 634 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 P4HTMQ9NXG6 502 aa6.74□□□□□ -1.33
LSM8-202ENST00000411938 ADAM22Q9P0K1 906 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms