RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MED13Q9UHV7 2174 aa16.14■□□□□ 0.17
MRPL55-220ENST00000411464 SHANK1Q9Y566 2161 aa16.14■□□□□ 0.17
MRPL55-220ENST00000411464 IGLV3-16A0A075B6K0 115 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 CCL22O00626 93 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 ZSCAN9O15535 394 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-220ENST00000411464 UGT2B7P16662 529 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 ACRV1P26436 265 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 PSMB4P28070 264 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 CDKN1CP49918 316 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-220ENST00000411464 SOX8P57073 446 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 MSLNQ13421 630 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-220ENST00000411464 SLC9A5Q14940 896 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 DEFB110Q30KQ9 67 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 ZNF658BQ4V348 819 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-220ENST00000411464 CRB2Q5IJ48 1285 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 ANKRD20A2Q5SQ80 823 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 ANKRD20A1Q5TYW2 823 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 ANKRD20A3Q5VUR7 823 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 TLDC1Q6P9B6 456 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 SERPINA9Q86WD7 417 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 CLDN19Q8N6F1 224 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 ZNF655Q8N720 491 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-220ENST00000411464 UBE2Q2Q8WVN8 375 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 PPP1R2P1Q96PQ5 205 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 OR2A14Q96R47 310 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 TBL1YQ9BQ87 522 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 NDC1Q9BTX1 674 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 CHRNA10Q9GZZ6 450 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 GOLPH3Q9H4A6 298 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 DHCR7Q9UBM7 475 aaKnown RBP16.13■□□□□ 0.17
MRPL55-220ENST00000411464 FEZ2Q9UHY8 353 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-220ENST00000411464 ICKQ9UPZ9 632 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 ASF1AQ9Y294 204 aa16.13■□□□□ 0.17
MRPL55-220ENST00000411464 MACROD2A1Z1Q3 448 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 H3BMH7 237 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 MFAP3LO75121 409 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 CHRM5P08912 532 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-220ENST00000411464 CTNNA2P26232 953 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 HADHBP55084 474 aaKnown RBP16.12■□□□□ 0.17
MRPL55-220ENST00000411464 ZIC1Q15915 447 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 NKAIN1Q4KMZ8 207 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 Q6ZS92 163 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 CDKL3Q8IVW4 592 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-220ENST00000411464 OR5AR1Q8NGP9 310 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 INPP5DQ92835 1189 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 BARD1Q99728 777 aaKnown RBP16.12■□□□□ 0.17
MRPL55-220ENST00000411464 OR6C2Q9NZP2 312 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 POLG2Q9UHN1 485 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 TDRKHQ9Y2W6 561 aaKnown RBP16.12■□□□□ 0.17
MRPL55-220ENST00000411464 PCDHGA10Q9Y5H3 936 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 DOPEY1Q5JWR5 2465 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 CRYBG3Q68DQ2 2970 aa16.12■□□□□ 0.17
MRPL55-220ENST00000411464 TRBV5-4A0A0C4DH59 114 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 A0A0J9YY10 115 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 AGPSO00116 658 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 MASP2O00187 686 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 LIN7AO14910 233 aaPredicted RBP16.11■□□□□ 0.17
MRPL55-220ENST00000411464 KCNN4O15554 427 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 HCRTR1O43613 425 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 KDM1AO60341 852 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 AP2A2O94973 939 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 ALAS2P22557 587 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 ITGA3P26006 1051 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 GABRA4P48169 554 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 MARCKSL1P49006 195 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 COPS2P61201 443 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 AIMP2Q13155 320 aaKnown RBP16.11■□□□□ 0.17
MRPL55-220ENST00000411464 SPARCL1Q14515 664 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 DENND5AQ6IQ26 1287 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 MRPL14Q6P1L8 145 aaKnown RBP16.11■□□□□ 0.17
MRPL55-220ENST00000411464 DARS2Q6PI48 645 aaKnown RBP16.11■□□□□ 0.17
MRPL55-220ENST00000411464 PPP1R32Q7Z5V6 425 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 CUZD1Q86UP6 607 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 TBC1D21Q8IYX1 336 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 ST6GALNAC3Q8NDV1 305 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 ACTL9Q8TC94 416 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 NACC2Q96BF6 587 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 DNAJC1Q96KC8 554 aaKnown RBP16.11■□□□□ 0.17
MRPL55-220ENST00000411464 ARNT2Q9HBZ2 717 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 ZBTB20Q9HC78 741 aaPredicted RBP16.11■□□□□ 0.17
MRPL55-220ENST00000411464 SPHK1Q9NYA1 384 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 SMARCAL1Q9NZC9 954 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 PLCL2Q9UPR0 1127 aa16.11■□□□□ 0.17
MRPL55-220ENST00000411464 ISM1B1AKI9 464 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 CNOT3O75175 753 aaKnown RBP16.1■□□□□ 0.17
MRPL55-220ENST00000411464 UMODP07911 640 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 MAGEA1P43355 309 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 FOXL2P58012 376 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 EIF3EP60228 445 aaKnown RBP16.1■□□□□ 0.17
MRPL55-220ENST00000411464 OTUD4Q01804 1114 aaKnown RBP16.1■□□□□ 0.17
MRPL55-220ENST00000411464 CACNG1Q06432 222 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 BRD3Q15059 726 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 IRAK1BP1Q5VVH5 260 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 TICAM1Q8IUC6 712 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 TMTC1Q8IUR5 882 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 VSTM4Q8IW00 320 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 SLC34A3Q8N130 599 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 DNAJC22Q8N4W6 341 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 CCDC110Q8TBZ0 833 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 KRT35Q92764 455 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms