RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ADCK2Q7Z695 626 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF34Q8IZ26 560 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 TDHQ8IZJ6 230 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 RYBPQ8N488 228 aaPredicted RBP2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 SLC5A8Q8N695 610 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 IL17RCQ8NAC3 791 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 KCTD6Q8NC69 237 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 SETD6Q8TBK2 473 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 RAET1EQ8TD07 263 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 GPT2Q8TD30 523 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 DUSP19Q8WTR2 217 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 PIGTQ969N2 578 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 SLAMF9Q96A28 289 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 URB1-AS1Q96HZ7 61 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 ADGRG7Q96K78 797 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 LYZL4Q96KX0 146 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 DGAT2Q96PD7 388 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 MS4A10Q96PG2 267 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 GCNAQ96QF7 691 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 FNBP1Q96RU3 617 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 GAD1Q99259 594 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 PAFAH2Q99487 392 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 DDOQ99489 341 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 MEIS3Q99687 375 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 FERMT1Q9BQL6 677 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 KLHL4Q9C0H6 718 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 ANKRD2Q9GZV1 360 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 COA1Q9GZY4 146 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 PIGMQ9H3S5 423 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 CCDC177Q9NQR7 707 aaPredicted RBP2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 NRBP1Q9UHY1 535 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 TRMT112Q9UI30 125 aaKnown RBP2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 SLC24A2Q9UI40 661 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 ANAPC2Q9UJX6 822 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 PTRH2Q9Y3E5 179 aaKnown RBP2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF711Q9Y462 761 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 INSL5Q9Y5Q6 135 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 TRPV2Q9Y5S1 764 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 SPTBN5Q9NRC6 3674 aaKnown RBP2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 ITGB4P16144 1822 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 PAPPA2Q9BXP8 1791 aa2.54□□□□□ -2
RNU6-1140P-201ENST00000410517 CEP290O15078 2479 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TTC28Q96AY4 2481 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 PRUNE2Q8WUY3 3088 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 A0A1W2PRQ8 180 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TMEM8BA6NDV4 472 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 BECN2A8MW95 431 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 H7C0S8 307 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 SOCS6O14544 535 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 SSX4O60224 188 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 WDR1O75083 606 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 NDUFS7O75251 213 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TRUB2O95900 331 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 LDLRP01130 860 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 ICAM1P05362 532 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 H1F0P07305 194 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 LINGO3P0C6S8 592 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 PRLRP16471 622 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 UGT1A1P22309 533 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 KCNA5P22460 613 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 EIF2S3P41091 472 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 HOXA1P49639 335 aaPredicted RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 RAD23AP54725 363 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 KRTAP10-12P60413 245 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 RPS18P62269 152 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 Q0VFX4 171 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TROAPQ12815 778 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 GAGE5Q13069 117 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 GAGE6Q13070 117 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 SNTA1Q13424 505 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 HNF4GQ14541 408 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF234Q14588 700 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TAF13Q15543 124 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 DLG2Q15700 870 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 KYNUQ16719 465 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 CCDC96Q2M329 555 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 EIF2S3LQ2VIR3 472 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TWISTNBQ3B726 338 aaPredicted RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 ACCSLQ4AC99 568 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 CBWD6Q4V339 395 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 FAM98BQ52LJ0 330 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 IGSF11Q5DX21 431 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 CBWD3Q5JTY5 395 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 SPOUT1Q5T280 376 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 LRIF1Q5T3J3 769 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 FKBP1CQ5VVH2 108 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 WDR73Q6P4I2 378 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF549Q6P9A3 640 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 C16orf54Q6UWD8 224 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 UNQ6126/PRO20091Q6UXV3 157 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 ANKRD23Q86SG2 305 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 EXOC3L1Q86VI1 746 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 IQCHQ86VS3 1027 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TMEM173Q86WV6 379 aaPredicted RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 KMT5CQ86Y97 462 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 THNSL1Q8IYQ7 743 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 MUC20Q8N307 709 aaPredicted RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 C1orf52Q8N6N3 182 aaKnown RBP2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 PRR26Q8N8Z3 221 aa2.53□□□□□ -2
RNU6-1140P-201ENST00000410517 TC2NQ8N9U0 490 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms