RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 AGRPO00253 132 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 BTN3A1O00481 513 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 TOX3O15405 576 aaPredicted RBP21.7■■□□□ 1.06
PTCD3-203ENST00000409783 BRINP1O60477 761 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 SPAG6O75602 509 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 POLR2CP19387 275 aaPredicted RBP21.7■■□□□ 1.06
PTCD3-203ENST00000409783 ETV5P41161 510 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 KBTBD12Q3ZCT8 623 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 CCSMST1Q4G0I0 132 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 FAM45BPQ6NSW5 357 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 IRGCQ6NXR0 463 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 PRSS42Q7Z5A4 293 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 CPNE9Q8IYJ1 553 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 GPATCH11Q8N954 259 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 FAM45AQ8TCE6 357 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 ZDHHC12Q96GR4 267 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 SLC46A1Q96NT5 459 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 CMKLR1Q99788 373 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 TSPYL1Q9H0U9 437 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 RHOJQ9H4E5 214 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 ASCL3Q9NQ33 180 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 TRMT6Q9UJA5 497 aaKnown RBP21.7■■□□□ 1.06
PTCD3-203ENST00000409783 NFU1Q9UMS0 254 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 VWA7Q9Y334 891 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 AK5Q9Y6K8 562 aa21.7■■□□□ 1.06
PTCD3-203ENST00000409783 EIF3FO00303 357 aaPredicted RBP21.69■■□□□ 1.06
PTCD3-203ENST00000409783 PSIP1O75475 530 aaKnown RBP21.69■■□□□ 1.06
PTCD3-203ENST00000409783 RPN2P04844 631 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 MPC1LP0DKB6 136 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 CBSLP0DN79 551 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 CCL4P13236 92 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 ENO3P13929 434 aaPredicted RBP21.69■■□□□ 1.06
PTCD3-203ENST00000409783 ITIH1P19827 911 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 MCM3P25205 808 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 CBSP35520 551 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 SKIV2L2P42285 1042 aaKnown RBP21.69■■□□□ 1.06
PTCD3-203ENST00000409783 BDKRB1P46663 353 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 KPNA2P52292 529 aaKnown RBP21.69■■□□□ 1.06
PTCD3-203ENST00000409783 UGT3A1Q6NUS8 523 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 PAQR3Q6TCH7 311 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 FAM92BQ6ZTR7 304 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 CEP128Q6ZU80 1094 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 BMPERQ8N8U9 685 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 AGBL5Q8NDL9 886 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 SKA2Q8WVK7 121 aaPredicted RBP21.69■■□□□ 1.06
PTCD3-203ENST00000409783 CDKL2Q92772 493 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 CNTNAP3BQ96NU0 1288 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 CNTNAP3Q9BZ76 1288 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 CDC42EP4Q9H3Q1 356 aaKnown RBP21.69■■□□□ 1.06
PTCD3-203ENST00000409783 CIDEBQ9UHD4 219 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 POMT2Q9UKY4 750 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 FREM2Q5SZK8 3169 aa21.69■■□□□ 1.06
PTCD3-203ENST00000409783 SNRNP200O75643 2136 aaKnown RBP21.68■■□□□ 1.06
PTCD3-203ENST00000409783 FGF3P11487 239 aaPredicted RBP21.68■■□□□ 1.06
PTCD3-203ENST00000409783 PKLRP30613 574 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 STX2P32856 288 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 SHMT2P34897 504 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.68■■□□□ 1.06
PTCD3-203ENST00000409783 PIWIL4Q7Z3Z4 852 aaKnown RBP21.68■■□□□ 1.06
PTCD3-203ENST00000409783 KDF1Q8NAX2 398 aaPredicted RBP21.68■■□□□ 1.06
PTCD3-203ENST00000409783 FLVCR1-AS1Q8TAF5 88 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 EEF1AKMT1Q8WVE0 214 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 KLHL6Q8WZ60 621 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 VPS39Q96JC1 886 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 PPM1MQ96MI6 270 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 FOPNLQ96NB1 174 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 CD180Q99467 661 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 MAP3K3Q99759 626 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 CPNE1Q99829 537 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 FUT8Q9BYC5 575 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 ZNF768Q9H5H4 540 aaKnown RBP21.68■■□□□ 1.06
PTCD3-203ENST00000409783 CCDC86Q9H6F5 360 aaKnown RBP21.68■■□□□ 1.06
PTCD3-203ENST00000409783 OCIAD1Q9NX40 245 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 APC2O95996 2303 aa21.68■■□□□ 1.06
PTCD3-203ENST00000409783 IGHV5-51A0A0C4DH38 117 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 FAM95CA0A1B0GW59 222 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 KRT87PA6NCN2 255 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 ARHGEF33A8MVX0 844 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 CDRT15L2A8MXV6 281 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 GFYI3L273 518 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 TSPAN12O95859 305 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 CSTF2P33240 577 aaKnown RBP eCLIP21.67■■□□□ 1.06
PTCD3-203ENST00000409783 CCNFP41002 786 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 MLLT3P42568 568 aaPredicted RBP21.67■■□□□ 1.06
PTCD3-203ENST00000409783 EFTUD2Q15029 972 aaKnown RBP eCLIP21.67■■□□□ 1.067e-7■■■■■ 34.2
PTCD3-203ENST00000409783 TEX35Q5T0J7 233 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 CACHD1Q5VU97 1274 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 FOXR1Q6PIV2 292 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 TMEM207Q6UWW9 146 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 LSMEM2Q8N112 164 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 LINC01555Q8NAE3 123 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 DENND1AQ8TEH3 1009 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 ASB11Q8WXH4 323 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 RAD51AP1Q96B01 352 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 ELMO2Q96JJ3 720 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 IL17FQ96PD4 163 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 RBBP8Q99708 897 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 SIDT1Q9NXL6 827 aaKnown RBP21.67■■□□□ 1.06
PTCD3-203ENST00000409783 SPHK1Q9NYA1 384 aa21.67■■□□□ 1.06
PTCD3-203ENST00000409783 OR6C2Q9NZP2 312 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms