RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 ADPRHL2Q9NX46 363 aa7.34□□□□□ -1.23
SH3D19-203ENST00000409598 PRODH2Q9UF12 536 aa7.34□□□□□ -1.23
SH3D19-203ENST00000409598 CDC7O00311 574 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 TFECO14948 347 aaPredicted RBP7.34□□□□□ -1.24
SH3D19-203ENST00000409598 TNFSF14O43557 240 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 MT-ND5P03915 603 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 F11P03951 625 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 FAM153BP0C7A2 387 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 TCF3P15923 654 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 TARSP26639 723 aaKnown RBP7.34□□□□□ -1.24
SH3D19-203ENST00000409598 DRG2P55039 364 aaKnown RBP7.34□□□□□ -1.24
SH3D19-203ENST00000409598 GPLD1P80108 840 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 LARS2Q15031 903 aaKnown RBP7.34□□□□□ -1.24
SH3D19-203ENST00000409598 GPRC6AQ5T6X5 926 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 LRRC8BQ6P9F7 803 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 TSSK4Q6SA08 328 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 C16orf89Q6UX73 402 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 LRRC74BQ6ZQY2 392 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 HFE2Q6ZVN8 426 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 BPHLQ86WA6 291 aaPredicted RBP7.34□□□□□ -1.24
SH3D19-203ENST00000409598 GATAD2AQ86YP4 633 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 CENPLQ8N0S6 344 aaPredicted RBP7.34□□□□□ -1.24
SH3D19-203ENST00000409598 TMEM178AQ8NBL3 297 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 SMRP1Q8NCR6 262 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 SLC13A3Q8WWT9 602 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 PSKH2Q96QS6 385 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 ELF4Q99607 663 aaPredicted RBP7.34□□□□□ -1.24
SH3D19-203ENST00000409598 CHRDQ9H2X0 955 aa7.34□□□□□ -1.24
SH3D19-203ENST00000409598 CPNE6O95741 557 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SRCP12931 536 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 TPSB2P20231 275 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 VSX2P58304 361 aaPredicted RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 TPSAB1Q15661 275 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 CPSF6Q16630 551 aaKnown RBP eCLIP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 PSAPL1Q6NUJ1 521 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 FAM92BQ6ZTR7 304 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SCML4Q8N228 414 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 CADM4Q8NFZ8 388 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 IFI44Q8TCB0 444 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ASB15Q8WXK1 588 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 IGSF8Q969P0 613 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 RGMAQ96B86 450 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ZFRQ96KR1 1074 aaKnown RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ZNF607Q96SK3 696 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 TMEM27Q9HBJ8 222 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 PRTFDC1Q9NRG1 225 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ENOPH1Q9UHY7 261 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SLC9A8Q9Y2E8 581 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SIK3Q9Y2K2 1263 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 KAT6AQ92794 2004 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ZNF891A8MT65 544 aaPredicted RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 A8MVJ9 347 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 TRIM13O60858 407 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 HLA-DQA2P01906 255 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 GSNP06396 782 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 RNH1P13489 461 aaKnown RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ATP5F1P24539 256 aaPredicted RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SOX11P35716 441 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 EMP2P54851 167 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SLC10A7Q0GE19 358 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 RPA4Q13156 261 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SP140Q13342 867 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 HERC3Q15034 1050 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 DECR1Q16698 335 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SPDYCQ5MJ68 293 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ZNF621Q6ZSS3 439 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 IKBIPQ70UQ0 350 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SHISA4Q96DD7 197 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 PAFAH2Q99487 392 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ATG10Q9H0Y0 220 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SEMA4BQ9NPR2 832 aaPredicted RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 HPF1Q9NWY4 346 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SPATA7Q9P0W8 599 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 HCSTQ9UBK5 93 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 BRWD3Q6RI45 1802 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 NDUFS4O43181 175 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 AHCYL1O43865 530 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 B4GALT2O60909 372 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 IL33O95760 270 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 IL12RB1P42701 662 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 TPMTP51580 245 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 CLCN7P51798 805 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ZNF41P51814 821 aaPredicted RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 SMSP52788 366 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 PCBP4P57723 403 aaKnown RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 LRRC36Q1X8D7 754 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 TRIM71Q2Q1W2 868 aaKnown RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 HKDC1Q2TB90 917 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 TTLL10Q6ZVT0 673 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 RTN4RL1Q86UN2 441 aaPredicted RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 UMODL1-AS1Q8N2C9 162 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ZNF516Q92618 1163 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 CMTM7Q96FZ5 175 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 PTCHD1Q96NR3 888 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 ANKRD27Q96NW4 1050 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 CD180Q99467 661 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 MRPL57Q9BQC6 102 aaKnown RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 LYARQ9NX58 379 aaKnown RBP7.33□□□□□ -1.24
SH3D19-203ENST00000409598 RNF103-CHMP3A0A140T963 221 aa7.33□□□□□ -1.24
SH3D19-203ENST00000409598 DCLK1O15075 740 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms