RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 C1orf61Q13536 156 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 UAP1L1Q3KQV9 507 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 TUBB8Q3ZCM7 444 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 PRRT3Q5FWE3 981 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 PRAMEF14Q5SWL7 426 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 TMEM79Q9BSE2 394 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 TRIM54Q9BYV2 358 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 RABEP2Q9H5N1 569 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 PTBP2Q9UKA9 531 aaKnown RBP16.4■□□□□ 0.22
SSB-202ENST00000409333 PCDH15Q96QU1 1955 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 PABPN1LA6NDY0 278 aaKnown RBP16.39■□□□□ 0.21
SSB-202ENST00000409333 SNNO75324 88 aaPredicted RBP16.39■□□□□ 0.21
SSB-202ENST00000409333 H2AFYO75367 372 aaKnown RBP16.39■□□□□ 0.21
SSB-202ENST00000409333 GRK2P25098 689 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 SLC1A6P48664 564 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 CDKL1Q00532 357 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 ASPHQ12797 758 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 SIM2Q14190 667 aaPredicted RBP16.39■□□□□ 0.21
SSB-202ENST00000409333 ZXDCQ2QGD7 858 aaPredicted RBP16.39■□□□□ 0.21
SSB-202ENST00000409333 UNC50Q53HI1 259 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 SULT1C3Q6IMI6 304 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 PRR23BQ6ZRT6 265 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 RAB44Q7Z6P3 723 aaPredicted RBP16.39■□□□□ 0.21
SSB-202ENST00000409333 FBXO15Q8NCQ5 510 aaPredicted RBP16.39■□□□□ 0.21
SSB-202ENST00000409333 PIGKQ92643 395 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 CHMP6Q96FZ7 201 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 PKP4Q99569 1192 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 GSDMCQ9BYG8 508 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 GSTO2Q9H4Y5 243 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 IMP3Q9NV31 184 aaKnown RBP16.39■□□□□ 0.21
SSB-202ENST00000409333 FGFR1OP2Q9NVK5 253 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 WWOXQ9NZC7 414 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 PCOLCE2Q9UKZ9 415 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 CABIN1Q9Y6J0 2220 aa16.39■□□□□ 0.21
SSB-202ENST00000409333 A6NCN8 305 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 SUPT7LO94864 414 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 CHRNGP07510 517 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 RPS17P08708 135 aaKnown RBP16.38■□□□□ 0.21
SSB-202ENST00000409333 GNSP15586 552 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 HSPA7P48741 367 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 ABCE1P61221 599 aaKnown RBP16.38■□□□□ 0.21
SSB-202ENST00000409333 OCRLQ01968 901 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 TEAD4Q15561 434 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 CFAP157Q5JU67 520 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 OR5K2Q8NHB8 316 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 SKA1Q96BD8 255 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 NSUN5Q96P11 429 aaKnown RBP16.38■□□□□ 0.21
SSB-202ENST00000409333 DRC3Q9H069 523 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 TAAR2Q9P1P5 351 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 PLAGL1Q9UM63 463 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 PCDHGA2Q9Y5H1 932 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 GMNCA6NCL1 334 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 PRR33A8MZF0 331 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 PRR5-ARHGAP8B1AHC4 643 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 TMEM114B3SHH9 223 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 GALR2O43603 387 aaPredicted RBP16.38■□□□□ 0.21
SSB-202ENST00000409333 F3P13726 295 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 TSPAN8P19075 237 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 GDF5P43026 501 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 CDH13P55290 713 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 BNC1Q01954 994 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 PRKG2Q13237 762 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 RCN2Q14257 317 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 GRB7Q14451 532 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 RPE65Q16518 533 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 LPAL2Q16609 132 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 KIF19Q2TAC6 998 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 CDKL4Q5MAI5 379 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 PEAR1Q5VY43 1037 aaPredicted RBP16.38■□□□□ 0.21
SSB-202ENST00000409333 ABRAXAS1Q6UWZ7 409 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 WASH2PQ6VEQ5 465 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 FRMD7Q6ZUT3 714 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 TAF8Q7Z7C8 310 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 SYT12Q8IV01 421 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 DCUN1D3Q8IWE4 304 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 LSMEM2Q8N112 164 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 UBTD2Q8WUN7 234 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 CCDC138Q96M89 665 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 SORT1Q99523 831 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 NRTNQ99748 197 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 HGH1Q9BTY7 390 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 C1QTNF3Q9BXJ4 246 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 PITPNM3Q9BZ71 974 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 EPN3Q9H201 632 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 TRIT1Q9H3H1 467 aaKnown RBP16.38■□□□□ 0.21
SSB-202ENST00000409333 WASH6PQ9NQA3 447 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 THAP1Q9NVV9 213 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 PCTPQ9UKL6 214 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 SNX11Q9Y5W9 270 aa16.38■□□□□ 0.21
SSB-202ENST00000409333 PRAMEF33A0A0G2JMD5 474 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 MYO1CO00159 1063 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 E2F3O00716 465 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 NPHS1O60500 1241 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 EDF1O60869 148 aaKnown RBP16.37■□□□□ 0.21
SSB-202ENST00000409333 SLC16A8O95907 504 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 MTHFD1P11586 935 aaKnown RBP16.37■□□□□ 0.21
SSB-202ENST00000409333 IMPA1P29218 277 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 HALP42357 657 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 CTSKP43235 329 aa16.37■□□□□ 0.21
SSB-202ENST00000409333 PCBP2Q15366 365 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms